Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2700g00001 ATGAAGTTAATGCACTGCCATGAACTGTGCAAGCCAGTTACTATCTTGATTCTAGTTAACTTAGCTCTTGCTTTTGTCAATTTACTTCTTAAAATGGTTCTCAATGAAGGAATGGATTACATGTCCATTGTAACATATCGACAAGCTATTTCATTTATCTTCATGGCACCTATTGCATGGTTCTATGAAAGGAAACACAAATTGGAGGCTCACATAATATGTCTCCTTTTTCTCTCTGCTCTTGTCGGAGTAACAATCCCCCAATACTTGTTTCTTCTTGGACTTCAGTATACATCTGCTACATTCTCTTGTGCATTCCTCAACATGGTGCCTGTATTTACATTCATCATGTCAGTTCCATTTGGGATAGAGAAGGTGAACATGAAAAGCAAGAGTGGTAAAGCCAAAATCTTGGGAACTATTGTGTGCATTGGTGGAGTTTTGATATTAGCCTTTTATAAAGGAATTTCCTTGAACAGCCCACAATCTCAACACATAGACAATAGATATACAAGTTCACCTCCCAAGTTAGAGAAATGGATTATAGGTTCAATACTTCTGACTGTAGGTTGCATCATGTGGTCTTCTTGGTTTGTTATACAAGCTAAGATTAGCAAAAGGTATCCATGTCAATACTCTAGCACTGCTATTTTGTCACTTTTTGCTGCTATTCAATCAGCAATATTAACTTTGGTCATCAAGAGAAACAATGCCTCATGGATCCTCAAAGGAAAGCTAGAAATATTGTGTGTAATATATGCTGGAATGGTGGGGTCAGGCCTGTGTTATGTGGCAATGTCATGGTGTGTCAAACAAAGAGGTCCAGTTTTTACTGCAGCATTTACCCCTCTTTTACAAATATTTGTGGCTGTGCTTGATTTCACTATACTAAAGGAGGAAATATACATAGGAAGTATTGCAGGATCTGTGTTGGTTATTGTTGGCATGTATATTCTTTTATTGGGAAAAAGCATGGAGGGAGAGCAATGTGTCGTGAAGGATACACAAGCAAATCAAGATGTAGAATGTCAATGA 1035 0.3768 MKLMHCHELCKPVTILILVNLALAFVNLLLKMVLNEGMDYMSIVTYRQAISFIFMAPIAWFYERKHKLEAHIICLLFLSALVGVTIPQYLFLLGLQYTSATFSCAFLNMVPVFTFIMSVPFGIEKVNMKSKSGKAKILGTIVCIGGVLILAFYKGISLNSPQSQHIDNRYTSSPPKLEKWIIGSILLTVGCIMWSSWFVIQAKISKRYPCQYSSTAILSLFAAIQSAILTLVIKRNNASWILKGKLEILCVIYAGMVGSGLCYVAMSWCVKQRGPVFTAAFTPLLQIFVAVLDFTILKEEIYIGSIAGSVLVIVGMYILLLGKSMEGEQCVVKDTQANQDVECQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2700g00001 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Trme2700g00001 344 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020
Trme2700g00001 344 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Trme2700g00001 344 PANTHER WAT1-RELATED PROTEIN 12 327 IPR030184 GO:0016020|GO:0022857
Trme2700g00001 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2700g00001 Trme-Chr2700 750 2534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2700g00001 8 254 Nodulin-like Gene Family AT3G30340 45.817 4.67e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2700g00001 - - gmx:100802053 565.459