Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme27001g00001 ATGGTGCGGCCGTCGGAGGAGGTTACACGACGAACCGTGTGGAACTCCAATGTTGATTTGGTGGTACCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNAATTTCTTTGATGCCAAGATAATGAAGGAAGCTCTAAGCAAGGTGCTTGTCCCGTTCTATCCAATGGCTGGCCGTCTTCGTCGTGATGAAGACGGCCGTGTTGAGATTGACTGTGATGGTCAAGGGGTGCTCTTTGTTGAGGCCGACACTGGAGCGGTCATCGATGACTTTGGTGACTTTGCTCCCACGCTTGAACTCCGTCAGCTTATCCCAGCCGTTGATTATTCACGCGGAATTGAATCGTATCCCCTTCTAGTATTGCAG 384 0.4401 MVRPSEEVTRRTVWNSNVDLVVPXXXXXXXXXXXXXXXXXNFFDAKIMKEALSKVLVPFYPMAGRLRRDEDGRVEIDCDGQGVLFVEADTGAVIDDFGDFAPTLELRQLIPAVDYSRGIESYPLLVLQ 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme27001g00001 128 Pfam Transferase family 1 128 - -
Trme27001g00001 128 Gene3D - 1 128 IPR023213 -
Trme27001g00001 128 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme27001g00001 Trme-Chr27001 311 694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme27001g00001 1 128 Monolignol Biosynthesis Gene Families AT5G48930 65.625 1.19e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme27001g00001 K13065 - gmx:100820075 199.134