Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2697g00001 ATGGGGGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTATAAATGCATTAGTTGCTGGTGGTTTTGGAGCTGCTGGGCAGAGGTGCATGGCTCTCAGCACAGTTATTTTTGTGGGAGGCTCGCAATCATGGGAAACTAAAATTTTAGAGCGTGCCAAAGCTCTTAAAGTAAACGCTGGAATTGAACCCGATTCAGATCTTGGTCCGGTCATCAGCAAACAGGCAAAGGAGCGAGTGAACATGTTAGTTCAATCTGGGGTTGAAAGTGGCGCCAAACTACTGCTTGATGGAAGAAATATTGTGGTCCCAGGATATGAATCTGGCAATTTTGTTGGCCCTACCATCTTATCAAATATCACTACCAACATGGAATGCTACCAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATGGAGGCTGATAGCTTGGAAGAGGCCATAAACATTATCAACAAAAACAAGTATGGAAATGGTGCTTCTATATTTACTAATTCTGGTGTTTCTGCAAGGAAATTTCAGACTGAGATTGAGGCCGGACAGGTTGGCATCAACGTTCCTATTCCAGTTCCTTTGCCATTTTTCTCATTTACCGGCAACAAGGCGTCATTTGCTGGCGATCTCAATTTCTATGGCAAAGCAGGGGTTAACTTTTATACACAGATCAAAACTATAACACAGCAGTGGAAGGATTCAGTTGGTGGTAGCAAGATTAACTTGGCAATGCCAACCTCTCAAAAATCTTGA 759 0.4269 MGAKNHAIVMPDANVDATINALVAGGFGAAGQRCMALSTVIFVGGSQSWETKILERAKALKVNAGIEPDSDLGPVISKQAKERVNMLVQSGVESGAKLLLDGRNIVVPGYESGNFVGPTILSNITTNMECYQEEIFGPVLLFMEADSLEEAINIINKNKYGNGASIFTNSGVSARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSVGGSKINLAMPTSQKS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2697g00001 252 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 4 237 IPR016163 GO:0016620
Trme2697g00001 252 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 27 38 IPR016160 GO:0016491
Trme2697g00001 252 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 2 202 - -
Trme2697g00001 252 Pfam Aldehyde dehydrogenase family 1 229 IPR015590 GO:0016491
Trme2697g00001 252 SUPERFAMILY ALDH-like 1 234 IPR016161 GO:0016491
Trme2697g00001 252 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 249 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2697g00001 Trme-Chr2697 10 2330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2697g00001 1 217 Aldehyde Dehydrogenase Gene Family AT2G14170 78.802 1.73e-119 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2697g00001 K00140 - gmx:100811544 456.832