Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26964g00001 GACGTGTATGAGTATGAGTTTATTGGGACGATTGTTGAAGAGGTTTTAAGAAAGATAAAACTTGTAGCCTTACCTATTGGTGATTACTTAGTTGGATTGGAGCCCCAAAAGGAACATGTGACTTCGCTTTTGAATATTGGGTCTGATGATGAAGTCAACATGCTAGGGATCCATGGAATTGGTGGAATAGGAAAAACGACTCTTGCTTTAGCAGTTTATAATTTGATTAGCAATCAATTTCAAGATAAGGAAATTGAGATAACAAGTGTTAGACAAGGAATTTCAAGATTACAACAGAGGCTCCACCAAAAAAAGGTTCTTTTGATTCTAGATGATGTTGACAATGAGGAACAATTACAGGCTATTGCTGGAAAACCTGGTTGGTTTGGTCTTGGAAGTAGAGTCATCATCACAACTCGGGACAAACGGTTGCTAACATGTCATGGG 447 0.3826 DVYEYEFIGTIVEEVLRKIKLVALPIGDYLVGLEPQKEHVTSLLNIGSDDEVNMLGIHGIGGIGKTTLALAVYNLISNQFQDKEIEITSVRQGISRLQQRLHQKKVLLILDDVDNEEQLQAIAGKPGWFGLGSRVIITTRDKRLLTCHG 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26964g00001 149 Gene3D - 86 149 IPR027417 -
Trme26964g00001 149 Gene3D - 7 85 IPR027417 -
Trme26964g00001 149 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 145 IPR044974 GO:0006952
Trme26964g00001 149 Pfam NB-ARC domain 76 144 IPR002182 GO:0043531
Trme26964g00001 149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 147 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26964g00001 Trme-Chr26964 22 558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26964g00001 1 145 WRKY Transcription Factor Family AT4G12020 33.143 1.51e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26964g00001 - - tpra:123907944 200.675