Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme269175g00001 TCTGCAGCTGCTATTGCTACCACTACTACAACTAGTGCTTCAACACCAACTCTTAGTGGTAATTTAGAAGCTGAAACAACGGCTTGCTTAGGTGGTGTTGATGCTTCTAATGGAAGATGGCCTAGACAAGAAACTCTTACTCTTCTTGAGATTAGATCTCGTCTTGATCCTCAATTCAAAGAAGCTACTCAAAAGGGTCCTCTTTGGGATCAACTTTCTAGGTAA 225 0.4133 SAAAIATTTTTSASTPTLSGNLEAETTACLGGVDASNGRWPRQETLTLLEIRSRLDPQFKEATQKGPLWDQLSR 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme269175g00001 74 PANTHER FI21293P1 13 73 - -
Trme269175g00001 74 Gene3D - 40 74 - -
Trme269175g00001 74 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme269175g00001 Trme-Chr269175 130 354 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme269175g00001 25 74 Trihelix Transcription Factor Family AT3G10000 60.000 1.59e-17 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme269175g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme269175g00001 - - psat:127125684 122.864