Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26828g00001 AGAAGAGAAATCAAAATTTTAAGATTGTTCATGCATCATCACATTATACGCCTTTATGAGGTTGTAGAAACGACGACAGACATATATGTGGTGATGGAATATGTGAAATCTGGAGAGCTCTTTGATTACATAGTAGAAAAAGGTAGGTTGCAAGAAGACGAAGCTCGCAGTTTCTTCCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTAGTTCATAGGGACCTGAAACCTGAGAATTTACTTTTGGACTCAAAATGGAGTGTCAAGATTGCTGATTTTGGCCTAAGCAATATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGCGGAAGCCCTAACTATGCAGCTCCAGAGGTTATCTCTGGGAAATTATATGCTGGACCGGAAGTAGATGTTTGGAGCTGTGGTGTAATTTTATACGCACTTCTCTGTGGCACTCTTCCTTTTGATGATGAAAATATTCCCAACCTCTTCAAAAAAATAAAG 498 0.3956 RREIKILRLFMHHHIIRLYEVVETTTDIYVVMEYVKSGELFDYIVEKGRLQEDEARSFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWSVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIK 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26828g00001 166 FunFam Maternal embryonic leucine zipper kinase 1 166 - -
Trme26828g00001 166 SMART serkin_6 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme26828g00001 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme26828g00001 166 PANTHER SERINE/THREONINE KINASE 2 165 - -
Trme26828g00001 166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Trme26828g00001 166 Pfam Protein kinase domain 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme26828g00001 166 Gene3D Transferase(Phosphotransferase) domain 1 1 166 - -
Trme26828g00001 166 SUPERFAMILY Protein kinase-like (PK-like) 1 165 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26828g00001 Trme-Chr26828 149 856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26828g00001 1 165 CBL-interacting serine-threonine protein kinases AT2G26980 57.143 3.62e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Trme26828g00001 Pkinase 2.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26828g00001 K07198 - qsa:O6P43_009110 333.569