Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26798g00001 GGCATTCTATTATTTGGTCCCCCGGGAACAGGTAAGACAATGCTTGCCAAGGCAGTTGCTACCGACGCTGGTGCAAACTTCATCAATATTTCCATGTCAAGCATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATACGTCAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCTCCCAGTGTGATATTTGTTGATGAAGTTGATAGCATGTTGGGCCGGAGGGAAAATCCAGGCGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGATACTGAACGTGTTCTTGTGCTCGCAGCCACCAATAGACCTTATGACCTTGATGAGGCTGTCATACGAAGGCTGCCTCGGAGATTAATGGTAAATTTACCAGATGCTCCAAATAGAGCAAAAATATTGAAAGTTATACTGGCAAAAGAGGACCTGTCTTCTGATGTTGATCTGAGTGCAATTGCAAGTATGACTGATGGATATTCTGGGAGTGATCTTAAGAACTTATGTGTAACCGCTGCACACCGTCCTATTAAAGAGATACTAGAAAAGGAAAAAAAGGAACTCGCTGCTGCTCTAGCAGAAGGTAGACCTGCACCTGCATTACGTGGAAGTGATGATATCCGATCTTTAAACATGGAAGACTTCAAACATGCTCACCAACAG 687 0.4367 GILLFGPPGTGKTMLAKAVATDAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPYDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDVDLSAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKELAAALAEGRPAPALRGSDDIRSLNMEDFKHAHQQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26798g00001 229 Pfam ATPase family associated with various cellular activities (AAA) 2 131 IPR003959 GO:0005524|GO:0016887
Trme26798g00001 229 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 229 - -
Trme26798g00001 229 ProSitePatterns AAA-protein family signature. 105 124 IPR003960 GO:0005524|GO:0016887
Trme26798g00001 229 SMART AAA_5 1 135 IPR003593 GO:0016887
Trme26798g00001 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 225 IPR027417 -
Trme26798g00001 229 Gene3D - 134 227 - -
Trme26798g00001 229 Pfam AAA+ lid domain 155 190 IPR041569 -
Trme26798g00001 229 Gene3D - 1 133 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26798g00001 Trme-Chr26798 1 1210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26798g00001 1 209 Calmodulin-binding Proteins AT3G56690 42.130 4.82e-42 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26798g00001 - - adu:107480734 409.068