Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme267646g00001 ATGTCGGACGAAGAGCACCATTTTGAATCCAAGGCCGATGCCGGTGCCTCCAAAACTTACCCTCAACAGGCCGGTACCATCCGTAAAAACGGTTACATTGTTATCAAAAACCGTCCTTGCAAGGTTGTTGAAGTTTCTACTTCTAAGACTGGGAAGCACGGACATGCTAAGTGTCACTTTGTTGCGATTGATATCTTCACTGCTAAGAAGCTTGAAGATATTGTTCCTTCTTCCCATAATTGTGATGTATGCA 253 0.4387 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVC 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme267646g00001 84 SUPERFAMILY Translation proteins SH3-like domain 15 83 IPR008991 -
Trme267646g00001 84 Gene3D - 1 84 IPR014722 -
Trme267646g00001 84 MobiDBLite consensus disorder prediction 1 23 - -
Trme267646g00001 84 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 50 57 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Trme267646g00001 84 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 1 83 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Trme267646g00001 84 FunFam Eukaryotic translation initiation factor 5A 1 84 - -
Trme267646g00001 84 NCBIfam translation initiation factor IF-5A 17 83 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme267646g00001 Trme-Chr267646 7 367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme267646g00001 1 83 Eukaryotic Initiation Factors Gene Family AT1G13950 96.386 2.25e-55 166