Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme267076g00001 AAGAAAGCAGCACCAAAGAAACCATCACGATCGAGTCCAACCACCGATCGTCCGTTATGGTATCCAGGTGCAAAGTCACCGGAGTGGCTTGACGGAAGTTTGATCGGAGATTACGGATTCGATCCATTCGGTTTGGGGAAACCAGCTGAGTATTTACAATTCGATCTTGATTCACTTGATCAGAATTTAGCGAAGAATCTTGCCGGAGATGTGATCGGAACTAGGACAGAATTTTCCGACGTGAAATCGACGCCGTTTCAGCCTTACACTGAGGTATTTGGACTTCAGAGGTTTAGAGAATGTGAATTGATTCATGGAAGATGGGCTATGCTTGCTACTCTTGGTGCTCTTACTGTTGAATGGCTTAC 368 0.4538 KKAAPKKPSRSSPTTDRPLWYPGAKSPEWLDGSLIGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLT 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme267076g00001 123 MobiDBLite consensus disorder prediction 1 23 - -
Trme267076g00001 123 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 122 IPR001344 GO:0009765|GO:0016020
Trme267076g00001 123 Pfam Chlorophyll A-B binding protein 27 122 IPR022796 -
Trme267076g00001 123 Gene3D Chlorophyll a/b binding protein domain 18 123 - -
Trme267076g00001 123 SUPERFAMILY Chlorophyll a-b binding protein 11 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme267076g00001 Trme-Chr267076 1 368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme267076g00001 14 123 Chloroplast and Mitochondria Gene Families AT5G01530 90.909 7.17e-73 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme267076g00001 K08915 - ini:109159025 228.024