Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26693g00001 AGGTACATCCGTAATAAGCTTTTCAGTGCTCTTCTAAAGAGAGAAATTACTGCATCTGATATTTTTGGAGCCACATTCATTAAGAGGATGCTCGGTAGTAGAAAAGTTTTCATTGTACTTGATGACGTAGGTAATGATGCACAATTAGAATATTTGTGCGAAGAACTTGATGACCTTGACCCAAACAGTAGGCTCATTGTCACGACAAGAGATAGACACACGCTGAGGAGAAATGTTGATGAGATATATGAGGTCACAAATTGGAATTTTCAAAAATCTCTAAGGCTTTTTTGTTTAGGAGCTTTCAAGCAAATATATCCTAAAGAGGGTTACAAACTTCTGTCGCAAAGGGCGGTTGTATATGCAGGAGGCGTTCCGTTAGCTTTAAAAGTTTTGGGTTCACATTTTTATTCAAGAAGTCCTGAATTCTGGGAACCTGAATTGAAAAATTTGGAGAACAAGGGGGAGTCCTTACATGGAATTCAAGAAGTGTTAAAAGTGAGCTATAATGGATTATCAGTCCGAGAAAAGGAAATGTTTCTAGATATTGCATTCTTTTTCAAAGATGAAAAAAGACATTTCGTGACAAGGATACTAGATGCTTGTGGTTTCAACGCTACTAGTGGAATAGACGTCCTTGAAGATAAAGCTCTTATCACTATTTCAAATGTCAATAAAATAGAAATGCATGATTTACTACAACAAATGGCTTTTGATATAGTTCGGCAAAAGAAAGACCGCACTACCAGAGACCCTAGAAAATGCAGCCGGTTAAGAGATATTGAGGAAGTTTGCGATGCATTTAAAAATAGCAAGGGGACACATAGAGTTGAAGGCATAATATTTGATTTGTCTCAAAAGGGAGATTTGCATGTTCGGGCTGACACATTCAACATGATGACTAAATTAAGATTTCTAAGATTGTATGTCCCCTTGACCAAGAAGAGATCACGTAACATATATCATCCTGAAGATATGATGCCATTTTCTGATAAATTGAGATATCTTGAGTGGAATGGATGTCCCTTGAAATCTCTTCCACACCCATTTTGCGCTGAGCTACTTGTTGAGATTCACTTGCCGCACAGCAATGTAGAATATCTATGGCACGGGATGCAG 1119 0.3771 RYIRNKLFSALLKREITASDIFGATFIKRMLGSRKVFIVLDDVGNDAQLEYLCEELDDLDPNSRLIVTTRDRHTLRRNVDEIYEVTNWNFQKSLRLFCLGAFKQIYPKEGYKLLSQRAVVYAGGVPLALKVLGSHFYSRSPEFWEPELKNLENKGESLHGIQEVLKVSYNGLSVREKEMFLDIAFFFKDEKRHFVTRILDACGFNATSGIDVLEDKALITISNVNKIEMHDLLQQMAFDIVRQKKDRTTRDPRKCSRLRDIEEVCDAFKNSKGTHRVEGIIFDLSQKGDLHVRADTFNMMTKLRFLRLYVPLTKKRSRNIYHPEDMMPFSDKLRYLEWNGCPLKSLPHPFCAELLVEIHLPHSNVEYLWHGMQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26693g00001 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 183 IPR027417 -
Trme26693g00001 373 Gene3D - 3 82 IPR027417 -
Trme26693g00001 373 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 368 IPR044974 GO:0006952
Trme26693g00001 373 Gene3D - 89 173 IPR042197 -
Trme26693g00001 373 PRINTS Disease resistance protein signature 30 44 - -
Trme26693g00001 373 PRINTS Disease resistance protein signature 122 136 - -
Trme26693g00001 373 SUPERFAMILY "Winged helix" DNA-binding domain 161 245 IPR036390 -
Trme26693g00001 373 Pfam NB-ARC domain 23 169 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26693g00001 Trme-Chr26693 1 1209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26693g00001 25 373 WRKY Transcription Factor Family AT5G45050 31.608 2.46e-45 165