Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26655g00001 ATGGAACATAATTTGGGTCAAGAATCTGGGCCTGCAGCTGATAAGTCTAGGGTTTTAAATGTGAAGCCATTGAGGACTCTTGTTCCTGTGTTTCCTTCACCGTCCAATCCTTCGTCATCTTCGACTCCACAAGGTGGTGCTCCTTTTGTTTGTGTTTCTCCTGCAGGACCTTTCCCCTCTGGTGTTGCACCGTTTTACCCTTTCTTCGTCTCGCCAGAGTCTCAGAGGCTTTCTGAACAGCATGCACCGAATGCAACTCCTCAACGTGCCACACCAATATCTACTGCTGTTCCAATTAATTCATTCAAGACTCCAACTGCAGCGACAAATGGAGATGTGGGTTCTTCACGGAAGAATAAGGGGAGTCGTGGTGGACAACTCACAGGGGAAGACGGCTACAACAACGAAGTAATTGATTTAGAAGATGGTACTGGGGATGGGAGTTCAAAGCAACGCAAGAAGAGGGGAAGGGCAAAGCGTGCTAGTGGTGCTGGTATCGATGGTAGTGGTGCTGGTGCGGTTTCTATTGAGGTTGATCTGGATGCCGTTGCTAATGATATTCTTCAATCAATTAACCCCATGGTTTTTGATGTGATAAATCATCCTGATGGTAGTAGGGATTCAGTTTCGTTTACACTTATGATATATGAAGTGCTGCGAAGGAAGCTTGGACAAATTGAAGAGTCAACAAAGGATGCTAATTCTGGAGCGAAGCGGCCGGATTTGAAGGCAGGAACAGTTATGATGACTAAAGGGGTTAGGAGTAACAGCAAGAAAAGGATTGGAATTGTGCCCGGTGTTGATGTTGGGGATATTTTCTTTTTCCGGTTTGAGATGTGCTTAGTGGGACTACATTCACCTTCTATGGCTGGAATTGATTACCTGGGTTCCAAAGCAAGTCAAGAGGAAGAGCCATTGGCTGTTAGTATTGTCTCATCTGGAGGTTATGAAGATAATACCGACGATGGAGATGTGCTAATTTACAGTGGTCAAGGTGGAGTCAACCGCGACAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGAGAAGAGCATGCATAGAGGTAATGATGTGAGAGTAATTAGGGGTTTGAAGGATGTAATGCATCCAACTGGGAAG 1131 0.4536 MEHNLGQESGPAADKSRVLNVKPLRTLVPVFPSPSNPSSSSTPQGGAPFVCVSPAGPFPSGVAPFYPFFVSPESQRLSEQHAPNATPQRATPISTAVPINSFKTPTAATNGDVGSSRKNKGSRGGQLTGEDGYNNEVIDLEDGTGDGSSKQRKKRGRAKRASGAGIDGSGAGAVSIEVDLDAVANDILQSINPMVFDVINHPDGSRDSVSFTLMIYEVLRRKLGQIEESTKDANSGAKRPDLKAGTVMMTKGVRSNSKKRIGIVPGVDVGDIFFFRFEMCLVGLHSPSMAGIDYLGSKASQEEEPLAVSIVSSGGYEDNTDDGDVLIYSGQGGVNRDKGASDQKLERGNLALEKSMHRGNDVRVIRGLKDVMHPTGK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26655g00001 377 MobiDBLite consensus disorder prediction 31 47 - -
Trme26655g00001 377 SMART G9a_1 257 377 IPR003105 -
Trme26655g00001 377 SUPERFAMILY PUA domain-like 244 371 IPR015947 -
Trme26655g00001 377 MobiDBLite consensus disorder prediction 77 123 - -
Trme26655g00001 377 MobiDBLite consensus disorder prediction 27 47 - -
Trme26655g00001 377 ProSiteProfiles YDG domain profile. 262 377 IPR003105 -
Trme26655g00001 377 Pfam SAD/SRA domain 261 369 IPR003105 -
Trme26655g00001 377 Gene3D - 244 376 IPR036987 -
Trme26655g00001 377 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 98 371 - -
Trme26655g00001 377 MobiDBLite consensus disorder prediction 77 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26655g00001 Trme-Chr26655 22 1152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26655g00001 197 373 Su(var)3-9 homologs AT5G04940 59.551 7.15e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26655g00001 K24405 - gmx:100805932 529.25