Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26639g00001 ATGAAAGAGGCAGCGAGAATAGCAAATGCTCATCATTTTATTAGCAGCTTGCCTCATGGTTATGACACTCATATTGGGATGAGAGGCGTTGACTTAACCCCAGGACAGAAACAGAGAATTGCAATTGCAAGGGTAGTGCTGAAAAACGCACCTATCTTGTTGTTGGATGAAGCAAGTTCATCAGTTGAATCCGAGTCAAGCCGAGTGATACAAGAAGCTCTAGACACACTAATAATGGGAAACAAGACCACTGTTTTAATAGCGCATAGAGCTGCAATGATGAGACACGTGGACAATATTGTAGTGCTTAATGGAGGACGAATAGTGGAAGAGGGAAGTCATGATTCGTTGGTGGCAAAGAATGGTCTGTATGTCCGATTGATGCAACCTCATTTTGATGAACCACTGACGACTTCTGCACCTGAAGGATTTTTCCAAGAATATCTGGTGGAAATTATGATTGGGCTTGAATTAGCACTCGACATTGATAGAGGCATAGGAGAGATACTGTAG 513 0.425 MKEAARIANAHHFISSLPHGYDTHIGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSVESESSRVIQEALDTLIMGNKTTVLIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFDEPLTTSAPEGFFQEYLVEIMIGLELALDIDRGIGEIL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26639g00001 170 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 127 IPR039421 -
Trme26639g00001 170 Pfam ABC transporter 13 59 IPR003439 GO:0005524
Trme26639g00001 170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 129 IPR027417 -
Trme26639g00001 170 Gene3D - 2 132 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26639g00001 Trme-Chr26639 467 1084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26639g00001 1 129 Calmodulin-binding Proteins AT2G36910 53.435 7.99e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26639g00001 K05658 - qsu:112016424 247.669