Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26536g00001 ATGGACAAAGCCTCTGTATTAGGTGATGCTATAAAGTATGTGAAGGAGCTTAAAGAGCAAGTGAAAGTGTTGGAAGAGCAAAGCAAAAAGAAAAGTGTAGAATCAGTTATGGTTGTGAAGAAATTGTCTCAACTTTATGTGGATGAAGATGTTTCAGACACTTCCTCAAATTCATGTGATGAAAACTCAGATGAAACCTCAAAAACATATTTGTCATCATTGCCAGAAGTTGAAGCTAGGTTGTCGGGGAAGAATGTGTTAATAAGAATTCTCTGTGAGAAAGATAAAGGAGTTATGGTGAATGTATATAGAGAGATAGAGAAACTTCATCTCTCAGTTATCAATGCTAGTTCATTTTCCTTTGGTTCCTCTGTTCTTGCCATAACCATCATCACCCAGTACGTTCTATGA 411 0.365 MDKASVLGDAIKYVKELKEQVKVLEEQSKKKSVESVMVVKKLSQLYVDEDVSDTSSNSCDENSDETSKTYLSSLPEVEARLSGKNVLIRILCEKDKGVMVNVYREIEKLHLSVINASSFSFGSSVLAITIITQYVL 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26536g00001 136 Coils Coil 7 34 - -
Trme26536g00001 136 Gene3D - 1 74 IPR036638 GO:0046983
Trme26536g00001 136 PANTHER BHLH TRANSCRIPTION FACTOR 1 133 - -
Trme26536g00001 136 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 35 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26536g00001 Trme-Chr26536 26 536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26536g00001 1 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 47.368 2.37e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26536g00001 - - mtr:11405744 171.014