Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26517g00001 GTTGTTAACTTAAGGAACCAAGGTTACGGGCTAGCAGCTGATATATGGAGCTTAGGGTGTACGGTTTTAGAGATGCTGACAAGGAAGCCACCTTACTTTGATTTGGAAGGAATGCAAGCAATATTTCGGATTGGCAGGGGTGAACCCCCACCCATTCCTGAATCTCTATCTAAAGATGCCCGAGATTTCATTCTTCAATGCTTACAAGTTAACCCAAGTAAACGCCCAACTGCAGCTCAGCTATCGGATCATCCATTTCTAAGGAGACGATCAAGTTCAGCTCTATCACCTCCTGTATTGACTCACCATGTTGATCCCGTGTTGAAGATAAATTCACCAAAAGGCAAGACTGCAGTAGCAGTAGCAAGAGTTCCACGAAGCTAA 384 0.4453 VVNLRNQGYGLAADIWSLGCTVLEMLTRKPPYFDLEGMQAIFRIGRGEPPPIPESLSKDARDFILQCLQVNPSKRPTAAQLSDHPFLRRRSSSALSPPVLTHHVDPVLKINSPKGKTAVAVARVPRS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26517g00001 127 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme26517g00001 127 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 93 - -
Trme26517g00001 127 SUPERFAMILY Protein kinase-like (PK-like) 4 109 IPR011009 -
Trme26517g00001 127 Gene3D Transferase(Phosphotransferase) domain 1 3 101 - -
Trme26517g00001 127 Pfam Protein kinase domain 4 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26517g00001 Trme-Chr26517 289 976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26517g00001 1 89 MAP Kinase Kinase Kinase AT4G08500 64.444 5.02e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trme26517g00001 Pkinase 7.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26517g00001 - K13414 aip:107631583 167.933