Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme264g00001 ATGTCCCTCAACGGAAATGACAAGCATCTCAAACCACAACAAGGAGAAGATCCTGTCCTTGTATTTACCTCACAAATAACAGGTTCCATTATTGTTCCATTGGCTTTGCGGTCAGCCATTGATCTTGGCATCTTTGAAATCCTAGCCAAAGCCGGTGAAGGCGCACAACTCTCTGCAGAAGACATTGCTGTTAAGATTGGAACCAACAATCCATTAGCACCAACAATGTTGGATCGTCTTCTTAGGTTGTTGGTCAGTCACTCTATTCTAAACTCCTCTGTTCCTGATCAACAAATATTGTACAGCTTAAGCAACAGATTTTTTCTCGCCGATGCTGATGGCATCTCTGTTGGACCCACCTTGGCATTACTTCTCGACGATGTCTACCACCAAAGCTGGTCGGAGCTGAAAGGAGCGATAGTGGAAGGAGGAATACCATTCAATAGAGTTCATGGAATGCATGCCTTTGAGTATGGAAGTGTGGATCCAAGGTTCAATGATGTTTTCAACAAAGCTATGTTTAGCTCAAGCACTCTAAATATGAAGAGGGTTCTTGCTGCTTATCAAGGTTTTGACCATGTCACTAAGCTGGTTGACGTTGGTGGTGGTCTTGGACGTAACCTCAAATTGATAACAGACCAATATTCTCATATTCATGGAATTAATCTTGACTTGCCTCATGTGATACAACATGCTCCTAACTTCCCTCGTGTGGAACATGTGGGAGGAGATATGTTTGAGAGCGTTCCTGCAGGGGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACACTGCTTGAAGCTGTTGAAAAATTGTTACAAAGCTATTCCTGCAGATGGAAAGGTTATTGTTTGTGAATCAATCCTTCCCAGTAAGCCAGAGACAACATGGAGTGCAAAGTTTGGTTATGCGACTGATCTTTTAATGATGACTCTACATGTAGGAGGAAAAGAGAGAACTGAGCAGGAATTCATAGAATTGGCAAAAGGATCTGGATTCACTGGCATCAAACCTATATGCTGTGTGTCTGGACTATGGGTTATTGAGTTCTTTAAGTAG 1071 0.422 MSLNGNDKHLKPQQGEDPVLVFTSQITGSIIVPLALRSAIDLGIFEILAKAGEGAQLSAEDIAVKIGTNNPLAPTMLDRLLRLLVSHSILNSSVPDQQILYSLSNRFFLADADGISVGPTLALLLDDVYHQSWSELKGAIVEGGIPFNRVHGMHAFEYGSVDPRFNDVFNKAMFSSSTLNMKRVLAAYQGFDHVTKLVDVGGGLGRNLKLITDQYSHIHGINLDLPHVIQHAPNFPRVEHVGGDMFESVPAGDAIFMKWILHDWSDEHCLKLLKNCYKAIPADGKVIVCESILPSKPETTWSAKFGYATDLLMMTLHVGGKERTEQEFIELAKGSGFTGIKPICCVSGLWVIEFFK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme264g00001 356 Gene3D Vaccinia Virus protein VP39 110 356 IPR029063 -
Trme264g00001 356 Pfam Dimerisation domain 35 85 IPR012967 GO:0046983
Trme264g00001 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 354 IPR029063 -
Trme264g00001 356 CDD AdoMet_MTases 196 289 - -
Trme264g00001 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 356 IPR016461 GO:0008168
Trme264g00001 356 FunFam Caffeic acid 3-O-methyltransferase 4 108 - -
Trme264g00001 356 PANTHER O-METHYLTRANSFERASE 27 337 IPR016461 GO:0008168
Trme264g00001 356 PIRSF O-mtase 4 356 IPR016461 GO:0008168
Trme264g00001 356 Pfam O-methyltransferase domain 133 337 IPR001077 GO:0008171
Trme264g00001 356 Gene3D - 3 107 IPR036388 -
Trme264g00001 356 SUPERFAMILY "Winged helix" DNA-binding domain 21 104 IPR036390 -
Trme264g00001 356 FunFam Caffeic acid O-methyltransferase 109 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme264g00001 Trme-Chr264 1130 2640 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme264g00001 7 356 Monolignol Biosynthesis Gene Families AT5G54160 49.441 1.80e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme264g00001 K13066 - gmx:100789402 468.388