Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26498g00001 ATGGAAGAAGAGCAACCGAGTCTTCCATTGGCGTTTAAAGAAAAGATTGAACAAATGAAAGGTGTTGACGTGAAGTTGGTAATTCAGAAAAAATTGACCATGAGTGACGTAAAAGGAGACAACAGCCGCTTTTATATCCCAATAGATAAGAAGATCGAAGAGAGTATTCTTTTGACACCATCAGAGAGATTGTCTTTGAATATCTACGTTCCTCAAAAAAAGAGAGAGAGGCTTGTTGGTATATCTATATCTATGTTGGATTATAATCTTAAAATTTGGGATGACATGTATCTTAAGAAGTGGAAAATGGGAAAATCCGAGATCTACAATATTACCGGTGGATGGGACAAACTTGTAGTAGAAAATTATTTGGAAGAATCTCAAAAGATACAACTTTGGTCGTTTAGATGCAACGATAGTCTCAATTTTGCACTCGTCAACTTTTAG 447 0.3557 MEEEQPSLPLAFKEKIEQMKGVDVKLVIQKKLTMSDVKGDNSRFYIPIDKKIEESILLTPSERLSLNIYVPQKKRERLVGISISMLDYNLKIWDDMYLKKWKMGKSEIYNITGGWDKLVVENYLEESQKIQLWSFRCNDSLNFALVNF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26498g00001 148 Pfam B3 domain-containing protein At2g31720-like 15 119 IPR005508 GO:0003677
Trme26498g00001 148 SUPERFAMILY DNA-binding pseudobarrel domain 27 141 IPR015300 -
Trme26498g00001 148 Gene3D - 18 145 IPR015300 -
Trme26498g00001 148 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 3 148 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26498g00001 Trme-Chr26498 614 1060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26498g00001 12 145 B3 DNA Binding Superfamily AT1G05930 26.667 3.00e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26498g00001 - - tpra:123890878 214.542