Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2648g00001 CTTGGTCCGATTCCAAAAAAATGGAAGGGAGTTTGTGCAGGTGGTAGTAACTTCAGTTGCAACAAGAAAATAATCGGAGCACGATTTTATGGGAGTGGAGTTGAGAGTGCAAGAGACATTATTGGTCATGGAACCCACACAACATCAACAACAGGTGGAAGAGAGGTGAAAGGTGTGAGTTTTGATGGTCTTGCAAAAGGCACTGCAAGAGGCGGAGTCCCATCTTCAAGAATTGCTACATACAAAGTTTGTGATTCACCTAGATGTAGTGGAGATGCTATTTTAGCTGCATTTGATGATGCCATTGCAGATGGAGTTGACGTCATCACCATCTCTATGGGTTCAAACACATGGCTTGAATTTGTCAATGATCCTATTGCCATCGGTTCTTTTCATGCCATGGAGAAGGGAATACTCACAACGCATGCCGTAGGAAACTCTGGTCCTTACCCAAGTAGTATTTCAAGTGTATCACCTTGGTTATTTAGTGTTGCTGCAACTAGCATTAATCGACAATTCATTACTAAGCTCATTCTTGGAAATGGAAAGACTTTCATTGGTACTTCAATCTATACCGGCCCTTCAAATGGTACCAAACTTCCAATAGCTGGCAAGCTTGTTTTGTGTGGAGCAGGTGGATTGTTTACTTCTGATATAGGTCTAATTGGTTCAATACTTAATGTTACAGACGCTGGATTTGATATTTCTTCTGTCACTTACAAGCCTTCCCTTAACTTGAAAACCAAGGACTTTGTTCAAGTTCAATCTTACACAAATTCTACTAAATACCCTATTGCTGAAATTTTAAAGAGTGAGATTTTCCACGACACCAATGCTCCTAAAGTTCCAATTTTCTCCTATCGTGGCCCAAATCCTTTGGTTCTAGAAATTATGAAACCAGATATAAGTGCACCNATTTTAAAGAGTGAGATTTTCCACGACACCAATGCTCCTAAAGTTCCAATTTTCTCCTCTCGTGGCCCAAATCCTTTGGTTCTAGAAATTATGAAACCAGATATAAGTGCACCAGGAATGAATATCTTAGCAGCATATTCACCTTTTGGGGAATCCTCAGGTGATATGGATGACAAGAGAAAGTTCAAATACAGCCTAGCAACTGGAACCTCTATGGCATGTCCTCACGTTGCTGGAGTTGTTGCGTATGTAAAATCATTTCATCCAGATTGGTCACCTGCAGCTATAAAATCTGCCATTATGACAACTGCTAAACCTGTGAAAGGTACTTATGCTGATTTGACAGGAGAATATGCTTATGGATCTGGGAATATCAATCCATAA 1299 0.4018 LGPIPKKWKGVCAGGSNFSCNKKIIGARFYGSGVESARDIIGHGTHTTSTTGGREVKGVSFDGLAKGTARGGVPSSRIATYKVCDSPRCSGDAILAAFDDAIADGVDVITISMGSNTWLEFVNDPIAIGSFHAMEKGILTTHAVGNSGPYPSSISSVSPWLFSVAATSINRQFITKLILGNGKTFIGTSIYTGPSNGTKLPIAGKLVLCGAGGLFTSDIGLIGSILNVTDAGFDISSVTYKPSLNLKTKDFVQVQSYTNSTKYPIAEILKSEIFHDTNAPKVPIFSYRGPNPLVLEIMKPDISAPILKSEIFHDTNAPKVPIFSSRGPNPLVLEIMKPDISAPGMNILAAYSPFGESSGDMDDKRKFKYSLATGTSMACPHVAGVVAYVKSFHPDWSPAAIKSAIMTTAKPVKGTYADLTGEYAYGSGNINP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2648g00001 432 SUPERFAMILY Subtilisin-like 15 432 IPR036852 GO:0004252|GO:0006508
Trme2648g00001 432 Gene3D Peptidase S8/S53 domain 308 432 IPR036852 GO:0004252|GO:0006508
Trme2648g00001 432 Gene3D Peptidase S8/S53 domain 1 220 IPR036852 GO:0004252|GO:0006508
Trme2648g00001 432 ProSiteProfiles Serine proteases, subtilase domain profile. 1 432 - -
Trme2648g00001 432 Pfam Subtilase family 36 426 IPR000209 GO:0006508|GO:0008236
Trme2648g00001 432 ProSitePatterns Serine proteases, subtilase family, serine active site. 374 384 IPR023828 -
Trme2648g00001 432 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 305 IPR045051 -
Trme2648g00001 432 PRINTS Subtilisin serine protease family (S8) signature 373 389 IPR015500 -
Trme2648g00001 432 PRINTS Subtilisin serine protease family (S8) signature 39 52 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2648g00001 Trme-Chr2648 500 1880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2648g00001 1 432 Subtilisin-like Serine Gene Family AT5G58830 48.182 3.41e-128 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2648g00001 - - psat:127076787 473.396