Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26478g00001 ATGATATGCTACCTTTTCTATATTTATTTTCTGCAGATTAACTTGAGGTGTTTGGATGGAATTCAAGGACCTGTTTATATTGGATCAGGTTGTATATTCAGAAGGAAAGCCTTAAATGGCTTCGATCCTCCTAAAGCGGCAAAGCGCTCTCAAATCGTACAAGTACACTCAAAACAAGATGAAAATGGAGAGGATGAAAGCATTATAGAAGCAACAGATGAAGACAAGCAGCTATTGCAATCAGATATGAATACTGAAAACAAATTTGGAAAGTCTACACTCTTCATGAATTCTTCATTAACAGAAGAAGGTGGTGTGGATCCTTCTTCAACTCAAGAAGCCTTACTTAAAGAAGCCATTCATGTCATGAGTTGTAGCTACGAAGACCGAACACTTTGGGGATACGAGGTTGGTATGAGCTATGGATCTATAGCAGCAGATACTCTTACAAGTTTAAAGATGCATACTCGCGGTTGGAGATCAGTATACTGCATGCCAAAGAGGGCTGCTTTTCGAGGAACAGCACCAATCAATCTTACAGAAAGACTTAACCAAGTACTTAGATGGGCTGTAGGATCACTTGAAATCCTATTCAGCCGCCACTGCCCATTATGGTATGGTTTTAAGGAAGGAAGACTCAAGGTTCTTCAAAGGATTGCCTATATTAACAGCACTGTCTACCCTTTTAGTGCATTACCTCTCACAATCTATTGTATCATTCCTGCCATCTGCTTGCTCACTGATAAATTCATCACACCATCG 762 0.399 MICYLFYIYFLQINLRCLDGIQGPVYIGSGCIFRRKALNGFDPPKAAKRSQIVQVHSKQDENGEDESIIEATDEDKQLLQSDMNTENKFGKSTLFMNSSLTEEGGVDPSSTQEALLKEAIHVMSCSYEDRTLWGYEVGMSYGSIAADTLTSLKMHTRGWRSVYCMPKRAAFRGTAPINLTERLNQVLRWAVGSLEILFSRHCPLWYGFKEGRLKVLQRIAYINSTVYPFSALPLTIYCIIPAICLLTDKFITPS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26478g00001 254 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 10 253 - -
Trme26478g00001 254 Pfam Cellulose synthase 8 53 IPR005150 GO:0016020|GO:0016760|GO:0030244
Trme26478g00001 254 Pfam Cellulose synthase 62 253 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26478g00001 Trme-Chr26478 36 1184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26478g00001 10 253 Cell Wall Biosynthesis AT5G17420 58.527 2.15e-106 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26478g00001 K10999 - gmx:100777270 402.519