Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme264759g00001 ATGTCACTAAAAGCTGGTGGTGTGGGCTTGAACTTGACTGCAGCCTCAAATGTTTTCCTTATGGATCCATGGTGGAATCCTGCAGTTGAGGAGCAAGCAATAATGAGGATTCATCGTATCGGGCAAAAGCGAAAGGTTACTGTAAGAAGATTCATTGTGAAG 162 0.4383 MSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRKVTVRRFIVK 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme264759g00001 54 Gene3D - 1 54 IPR027417 -
Trme264759g00001 54 CDD SF2_C_SNF 1 52 - -
Trme264759g00001 54 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 1 54 - -
Trme264759g00001 54 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 53 IPR027417 -
Trme264759g00001 54 Pfam Helicase conserved C-terminal domain 3 41 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme264759g00001 Trme-Chr264759 101 350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme264759g00001 1 54 RAD5 or RAD16-like Gene Family AT5G43530 94.444 2.61e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme264759g00001 K15505 - msin:131226245 109.383