Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme264667g00001 GGAGTTAGACAACGGCCGTGGGGAAAATGGGCGGCGGAGATAAGAGACCCGTCGCGTGGTGTGCGCGTGTGGCTTGGCACGTTTCAAACTGCTGAAGAAGCTGCTATTGTGTACGATAACGCGGCTATTAAGTTGCGTGGACCAGACGCGCTAACTAATTTTATAACTCCACCCTCCACGTGTCAGTTATCATCACCGGATAATCAAAAACCTCCTCAGCAGTTACCGTTACCGGTAACAAACTCCGGTTACATTTCCGGCGAAGAATCACAATCACAATCTCAAAACAACAATAAGAGTTTGTTTTCTCCTAAATCAGTTCTTCATTGTTGTTCATCTTCAGAAGAAGTAGCTGAATCTGAGTCACT 368 0.462 GVRQRPWGKWAAEIRDPSRGVRVWLGTFQTAEEAAIVYDNAAIKLRGPDALTNFITPPSTCQLSSPDNQKPPQQLPLPVTNSGYISGEESQSQSQNNNKSLFSPKSVLHCCSSSEEVAESESL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme264667g00001 123 SUPERFAMILY DNA-binding domain 1 54 IPR016177 GO:0003677
Trme264667g00001 123 SMART rav1_2 1 61 IPR001471 GO:0003700|GO:0006355
Trme264667g00001 123 PANTHER DNA-BINDING DOMAIN 1 99 IPR044808 GO:0003700|GO:0009873
Trme264667g00001 123 MobiDBLite consensus disorder prediction 56 103 - -
Trme264667g00001 123 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Trme264667g00001 123 Gene3D AP2/ERF domain 1 56 IPR036955 GO:0003700|GO:0006355
Trme264667g00001 123 Pfam AP2 domain 1 47 IPR001471 GO:0003700|GO:0006355
Trme264667g00001 123 FunFam Ethylene-responsive transcription factor 2 1 56 - -
Trme264667g00001 123 PIRSF PTI6 1 119 IPR017392 GO:0003700
Trme264667g00001 123 ProSiteProfiles AP2/ERF domain profile. 1 55 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme264667g00001 Trme-Chr264667 1 368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme264667g00001 1 109 AP2-EREBP Transcription Factor Family AT4G27950 54.128 4.65e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trme264667g00001 AP2 8.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme264667g00001 - - mtr:11438409 163.31