Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26345g00001 GAGGAAGCACGAGAAGTGGGGAATCTAAGAAATGAGAGATTAGCTAACTTGGTTGGTTATTGCTGTGAAGGAGAAGAGAGATTGCTAGTTGCTGAGTTTATGCCTAATGAAACTCTCTCTAAACATCTATTTCACTGGGAGACTCAGCCTATGAAATGGGAAATGAGGTTGAGAGTGGCCTTGTATTTAGCAGAAGCTTTGGAATACTGCAGCAATAGAGGAAAGACATTGTACCATGATCTTAATGCTTACAGAATTTTGTTTGATCAAGATGGCAACCCTAGACTGTCTTGTTTTGGACTAATGAAAAACAGCAGAGATGGTAGAAGTTATAGTACAAATTTAGCTTTTGCCCCTCCAGAATATTCGAGGACAGGTAAAAATTTAAGGAGAAAATGGGGATAA 405 0.3901 EEAREVGNLRNERLANLVGYCCEGEERLLVAEFMPNETLSKHLFHWETQPMKWEMRLRVALYLAEALEYCSNRGKTLYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFAPPEYSRTGKNLRRKWG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26345g00001 134 Gene3D Transferase(Phosphotransferase) domain 1 35 132 - -
Trme26345g00001 134 Gene3D Phosphorylase Kinase; domain 1 1 33 - -
Trme26345g00001 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme26345g00001 134 SUPERFAMILY Protein kinase-like (PK-like) 2 126 IPR011009 -
Trme26345g00001 134 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 127 IPR045845 GO:0004672|GO:0009742
Trme26345g00001 134 Pfam Protein tyrosine and serine/threonine kinase 2 114 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26345g00001 Trme-Chr26345 58 961 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26345g00001 9 127 Glycoside Hydrolase AT3G07070 37.984 4.40e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Trme26345g00001 PK_Tyr_Ser-Thr 1.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26345g00001 - - gmx:100804210 243.817