Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26339g00001 ATTGGATTTGTGACACAAGATGATGTTTTGTTTCCTCACCTAACTGTGAAAGAGACATTAACATATGCGGCTCGTTTAAGGTTGCCAAAAACATTAACCAAAGAAGAAAAGGAAAAAAGAGCTTTAGATGTTATCTATGAGTTAGGCTTGGAGAGGTGCCAAGACACTATGATAGGAGGTTCGTTTGTTCGAGGAGTATCCGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAATCCTTCTCTTTTGTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACTGCCTTAAGGATAGTTCAAATGTTACATGACATAGCCGAGGCTGGTAAAACTATAGTGACAACAATCCATCAACCATCAAGTAGACTCTTTCACAAATTTGACAAGTTGATCCTTTTGGGAAAAGGGAACTTACTTTACTTTGGAAAAGCATCAGAAGCAATGGACTATTTCAAGTTTATAGGGTGTAGTCCTCTCATTACCATGAATCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACATGCTTGATATTTCTGTACCATCAGAGTTAGAGGATAAAGTTCATATGGGAAATGTAGAAACTGAAGCTTCCAATGGGAAACCATCAGCTGCAGCTGTACAAGAGGCATCCGACTCATCAAGAAGAAGGAAGATATAA 681 0.3847 IGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTKEEKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLHDIAEAGKTIVTTIHQPSSRLFHKFDKLILLGKGNLLYFGKASEAMDYFKFIGCSPLITMNPAEFLLDLANGNMLDISVPSELEDKVHMGNVETEASNGKPSAAAVQEASDSSRRRKI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26339g00001 226 Pfam ABC-2 type transporter 123 182 IPR043926 GO:0140359
Trme26339g00001 226 ProSitePatterns ABC transporters family signature. 66 80 IPR017871 GO:0005524|GO:0016887
Trme26339g00001 226 Pfam ABC transporter 1 94 IPR003439 GO:0005524
Trme26339g00001 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 160 IPR027417 -
Trme26339g00001 226 MobiDBLite consensus disorder prediction 201 226 - -
Trme26339g00001 226 MobiDBLite consensus disorder prediction 203 217 - -
Trme26339g00001 226 Gene3D - 1 160 IPR027417 -
Trme26339g00001 226 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26339g00001 Trme-Chr26339 67 1130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26339g00001 1 152 Calmodulin-binding Proteins AT2G36910 29.870 1.11e-07 50.1