Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2630g00001 ATGTATGTGGCCACTGGACAACACATATACATGAATGAACGGGAGGCTATCGATCATATTGTTGAAAAAGTTACTTTTTTGCTTGACAAGACAGACTTATTTGTTGCTGATAATCCGGTGGGAGTCGAATCTCGAGTGCAAGATACAATTCAACTTCTAGACATCCAACAATCAAATCATGTTCTGTTACTAGGGATGTGGGGTATGGGGGGATCCGGTAAAACAACCATTGCAAAAGCCATTTACAACAAAATTGGCCGCAATTTTGAAGAAATCGGAATAAATGTCCTTGTTGAGCGAAGCCTTGTAACCGTTGATGATAAGAACAAGCTTGGGATGCATGATTTGTTACGTGATATGGGAAGAGAAATCATTCGTGAAAAATCACCAAAGGAACCTGAGGAGCGCAGTAGGTTATGGTTTCACGAAGATGTGCTTGATGTTTTAATTGAACGAACTGGAACAAAAGCAGTTGAGGGACTAGCTTTGAAGTTGCCAATAGTTAGTTCAAAATGTTTTAGTACTAAAGCATTTAAGAAGATGAAGAGACTTAGATTGCTTCAACTTGCTGGGGAAATTTAG 582 0.3918 MYVATGQHIYMNEREAIDHIVEKVTFLLDKTDLFVADNPVGVESRVQDTIQLLDIQQSNHVLLLGMWGMGGSGKTTIAKAIYNKIGRNFEEIGINVLVERSLVTVDDKNKLGMHDLLRDMGREIIREKSPKEPEERSRLWFHEDVLDVLIERTGTKAVEGLALKLPIVSSKCFSTKAFKKMKRLRLLQLAGEI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2630g00001 193 SUPERFAMILY "Winged helix" DNA-binding domain 79 149 IPR036390 -
Trme2630g00001 193 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 92 187 IPR044974 GO:0006952
Trme2630g00001 193 Pfam NB-ARC domain 44 131 IPR002182 GO:0043531
Trme2630g00001 193 Gene3D - 14 153 IPR027417 -
Trme2630g00001 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 92 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2630g00001 Trme-Chr2630 767 2404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2630g00001 12 90 WRKY Transcription Factor Family AT4G12020 37.975 9.21e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2630g00001 - - lja:Lj0g3v0331109.1 184.496