Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme262506g00001 AATCTTGGAATGATGACTAGTGGTTATGTGTGGATTGCAACAGATTGGCTTCCTTCAAAGTTGGATTCAATAGAGCCAGTTGATGCTAACACATTAAATCTCCTTCAAGGTGTTATAGCTTTGAGGCATCACACTCCTGATACTAATCTCAAAAAGAGTTTTTTCTCTAGGTTGAAGAACATAAGCGGCACGGAAACTTCAAGCTTCAACTCGTATGCTTTATATGCATATGATTCTGTCTGGTTAGCAGCTTATGCTCTTGATACTTTTCTCAAAGAAGGTGGAAACATATCTTTCTCATCTGATCCTAAGTTAATTGACACAAAAGGAAGCATGTTGCATTTGTCTTCGCTTCGTGTTTTCGATGGTGG 371 0.3854 NLGMMTSGYVWIATDWLPSKLDSIEPVDANTLNLLQGVIALRHHTPDTNLKKSFFSRLKNISGTETSSFNSYALYAYDSVWLAAYALDTFLKEGGNISFSSDPKLIDTKGSMLHLSSLRVFDGG 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme262506g00001 124 Gene3D - 13 124 - -
Trme262506g00001 124 SUPERFAMILY Periplasmic binding protein-like I 2 100 IPR028082 -
Trme262506g00001 124 PANTHER OS06G0188250 PROTEIN 2 92 - -
Trme262506g00001 124 Pfam Receptor family ligand binding region 2 122 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme262506g00001 Trme-Chr262506 1 371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme262506g00001 1 124 Ion Channels AT1G05200 57.258 6.07e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme262506g00001 K05387 - qsa:O6P43_028681 199.519