Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26205g00001 ATGATTGACCTGCTAGAAATCCAACAATCAAATGATGTTTTACTACTAGGGATGTGGGGTATGGGAGGTATTGGTAAAACAACTATTGCAAAAGCTGTCTACAATAAAATTGGCCGCAATTTTGATGGTAGGAGCTTTCTTGCAAATATTAGAGAAGTTTGGGAGCAAATTGTTGGACAAGTGTCTTTACAAGAACAAATTCTCTTTGATATCTGCAAAGAAACAACTAAGATACAAAACATTGAATTGGGAAAAGTTATATTAAAAGATAGACTCCGCCATAAAAGAATACTTCTTGTACTTGATGATATTAATACATTGGACCAATTGAATGCTTTGTGTGGATGTCGTGAATACCTTGGTCCAGGGAGTAGAATAATCATCACAACTAGAGATATGCATATTATGAGAGGGAATAGAGTTGATCGAGTATACAAAATGAAAGAAATGGATGAAATTGAGTCAATTGAACTTTTCAGTTGGCATGCATTCAAGCAAGCGAGTCCCGATGAAGATTTTGTTGAAATTTCCAAAAATGTAATTGAGTATTCTGGGGGATTGCCTCTAGCTTTGGAAGTCCTTGGGTCATATTTGTTTGATAGGAGTGTAACAGAGTGGAAGTGTGCATTGGAAAAACTCAAAAGAATTCCTAATGATCAAGTACAAAAGAAATTAAAAATAAGCTACGATGGTTTAAATGATGACACTGAGAAAGAAATATTTCTTGATATAGCTTGTTTCTTTATTGGAATGGATCGAAATGATGTTATACAAATATTAGATGGCTGTGAACTTTATGCAGAAATTGGAATAAGTGTTCTTGTTGAGCGAAGCCTTGTTATTGTTGATGATAAAAATAGGCTTGGAATGCATGATTTGCTACGAGATATGGGAAGAGAAATCATTCGTGAGAAATCGCCGAAGGAGCCTGAG 933 0.3505 MIDLLEIQQSNDVLLLGMWGMGGIGKTTIAKAVYNKIGRNFDGRSFLANIREVWEQIVGQVSLQEQILFDICKETTKIQNIELGKVILKDRLRHKRILLVLDDINTLDQLNALCGCREYLGPGSRIIITTRDMHIMRGNRVDRVYKMKEMDEIESIELFSWHAFKQASPDEDFVEISKNVIEYSGGLPLALEVLGSYLFDRSVTEWKCALEKLKRIPNDQVQKKLKISYDGLNDDTEKEIFLDIACFFIGMDRNDVIQILDGCELYAEIGISVLVERSLVIVDDKNRLGMHDLLRDMGREIIREKSPKEPE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26205g00001 311 PRINTS Disease resistance protein signature 184 198 - -
Trme26205g00001 311 PRINTS Disease resistance protein signature 15 30 - -
Trme26205g00001 311 PRINTS Disease resistance protein signature 91 105 - -
Trme26205g00001 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 244 IPR027417 -
Trme26205g00001 311 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 310 IPR044974 GO:0006952
Trme26205g00001 311 Gene3D - 149 233 IPR042197 -
Trme26205g00001 311 SUPERFAMILY "Winged helix" DNA-binding domain 220 306 IPR036390 -
Trme26205g00001 311 Gene3D - 1 144 IPR027417 -
Trme26205g00001 311 Pfam NB-ARC domain 6 229 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26205g00001 Trme-Chr26205 1 933 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26205g00001 4 306 WRKY Transcription Factor Family AT5G45050 38.511 1.52e-59 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26205g00001 - - cam:101494533 518.85