Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26196g00001 ATTTTTGTTCCAAAACTCAGCTCGAGAACTATACAACAAGCTGTTGGAGTTGTGGGCTGTCTTATAATGCCTCACAATGTATTCTTGCATTCTGCTCTTGTTCAATCAAGACAAGTTGATCACAGCAACCAAGGCCGAGTTCAAGAAGCGCTTAATTATTTCTCAATAGAGTCCACACTTGCCTTGATAGTCTCCTTTATTATCAACATATTTGTCACAGCTGTGTTTGCGAAAGGGTTTTATGGTAAAGAAACGGCGAATAGTATTGGCCTTGTAAATGCKGGACAGTATCTYCARGATACTTATGGAGGTGGAATGTTTCCGATATTGTATATATGGGGTATTGGATTGTTAGCAGCTGGTCAAAGTAGCACTATAACCGGKACATATGCCGGACAATTTATCATGGGAGGTTTTCTAAATTTAAGGTTGAAGAAATGGATGAGAGCGTTGATTACTCGAAGTTTTGCAATAGTCCCAACGATGATAGTTGCTCTTATATTTGATGCTACGGAGGATTCACTCGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCGGTACAAATCCCCTTTGCACTTATTCCTTTGCTTTGTTTGGTGTCAAAGGAACAAATAATGGGCACTTTCAAAATCGGCAMTGTCCTMAAGCTGAAGTGA 660 0.3939 IFVPKLSSRTIQQAVGVVGCLIMPHNVFLHSALVQSRQVDHSNQGRVQEALNYFSIESTLALIVSFIINIFVTAVFAKGFYGKETANSIGLVNAGQYLQDTYGGGMFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIVPTMIVALIFDATEDSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFKIGXVLKLK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26196g00001 219 PRINTS Natural resistance-associated macrophage protein signature 14 37 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme26196g00001 219 PRINTS Natural resistance-associated macrophage protein signature 183 202 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme26196g00001 219 PRINTS Natural resistance-associated macrophage protein signature 121 140 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme26196g00001 219 PRINTS Natural resistance-associated macrophage protein signature 149 166 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme26196g00001 219 Pfam Natural resistance-associated macrophage protein 2 213 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme26196g00001 219 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 2 217 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26196g00001 Trme-Chr26196 301 1213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26196g00001 1 217 Inorganic Solute Cotransporters AT2G23150 80.645 5.78e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26196g00001 K21398 - gmx:547711 391.349