Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26149g00001 ATGATAGCTCATCTCTTCAATGCACCACTTGAAGAGTCAGAACCTGCAGTTGGTGTTGGCACTGTTGGCTCATCAGAGGCCATAATGTTAGCTGGATTAGCATTCAAGAGAAAGTGGCAAAACAGAATGAAAAATGCAGGGAAGTCTTGTGACAATCCCAACATTGTCACTGGTGCCAATGTTCAGGTTTGCTGGGAGAAATTCGCAAGGTACTTTGAGGTGGAATTGAAAGAGGTGAAGCTGAGCGATGGATACTATGTATTGGACCCTGAAAAAGCTGTTGAAATGGTGGACGAGAACACCATTTGTGTCGCTGCTATTCTTGGTTCCACACTAAACGGGGAATTCGAAGATGTCAAGCGCTTAAACGATCTCTTAATAGCAAAAAATGCTGAAACTGGTTGGGAAACTCCAATTCATGTAGATGCAGCCAGTGGTGGATTCATAGCACCATTTCTTTATCCAGAGCTAGAGTGGGACTTTCGTTTACCACTTGTGAAGAGTATTAATGTTAGTGGACACAAATATGGTCTAGTCTATGCTGGTATTGGTTGGGTCATTTGGAGAAGCAAAGACGACCTTCCTGATGAACTCATCTTTCACATTAACTACCTTGGAGCTGACCAACCTACCTTCACTCTCAACTTCTCCAAAG 655 0.4321 MIAHLFNAPLEESEPAVGVGTVGSSEAIMLAGLAFKRKWQNRMKNAGKSCDNPNIVTGANVQVCWEKFARYFEVELKEVKLSDGYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIAKNAETGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKDDLPDELIFHINYLGADQPTFTLNFSK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26149g00001 218 PANTHER GLUTAMATE DECARBOXYLASE 1 218 IPR010107 GO:0004351|GO:0006536|GO:0030170
Trme26149g00001 218 Pfam Pyridoxal-dependent decarboxylase conserved domain 1 218 IPR002129 GO:0016830|GO:0019752|GO:0030170
Trme26149g00001 218 Gene3D - 1 218 IPR015421 GO:0003824
Trme26149g00001 218 SUPERFAMILY PLP-dependent transferases 1 217 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26149g00001 Trme-Chr26149 118 1185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26149g00001 1 218 Calmodulin-binding Proteins AT5G17330 89.908 1.63e-146 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26149g00001 K01580 - sind:105178200 421.009