Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme261413g00001 GATCTCAATTTATTTGAGATCATAGCTAAGGCAACACCACCCGGTGCTTTCATGTCACCATCCGAAATTGCTTCTAAATTGCCGCCATCAACCCAACACTCAGACTTGTCTAATAGGCTCGACCGAATGTTGCGTTTGCTTGCCAGTTATTCCGTTCTTACTTCTACCACCCGAACTACCGAGCACGGTAGCACTGAGAGAGTTTACGGACTCTCAATGGTTGGAAAATACCTTGTCCCCGATGAAAGTAGAGGATCCTTGGCTTCATTCACTACATTTATGTGTTATCCTGCATTGTTACAAGTTTGGTAA 312 0.4423 DLNLFEIIAKATPPGAFMSPSEIASKLPPSTQHSDLSNRLDRMLRLLASYSVLTSTTRTTEHGSTERVYGLSMVGKYLVPDESRGSLASFTTFMCYPALLQVW 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme261413g00001 103 PANTHER O-METHYLTRANSFERASE 1 92 IPR016461 GO:0008168
Trme261413g00001 103 SUPERFAMILY "Winged helix" DNA-binding domain 1 82 IPR036390 -
Trme261413g00001 103 Gene3D - 1 103 IPR036388 -
Trme261413g00001 103 FunFam Caffeic acid 3-O-methyltransferase 1 78 - -
Trme261413g00001 103 Pfam Dimerisation domain 1 48 IPR012967 GO:0046983
Trme261413g00001 103 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 103 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme261413g00001 Trme-Chr261413 2 313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme261413g00001 1 103 Monolignol Biosynthesis Gene Families AT1G51990 41.748 1.89e-20 82.0