Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme261268g00001 ATGGTTGATCCAAAGAAAGGAGCACTTGCTGGGCTTGGCCCAACTTTGGTTGGGTTTGTTGTTGGGGCTAACATCTTGGCTGGTGGGGCTTTTTCAGCTGCTTCAATGAACCCAGCAAGATCTTTTGGGCCTGCTTTGGTTAGTGGAAATTGGACTGATCATTGGGTTTATTGGGTTGGGCCTCTTATTGGTGGTGGGCTTGCTGGTTTCATTTATGAGAATTTCTTCATCAATAGAGATCATGTTCCTTTAGTTGCAGATGAAGAAAGCTATTAA 276 0.442 MVDPKKGALAGLGPTLVGFVVGANILAGGAFSAASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYENFFINRDHVPLVADEESY 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme261268g00001 91 PRINTS Major intrinsic protein family signature 18 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme261268g00001 91 PRINTS Major intrinsic protein family signature 55 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme261268g00001 91 Pfam Major intrinsic protein 3 72 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme261268g00001 91 Gene3D Glycerol uptake facilitator protein. 1 88 IPR023271 -
Trme261268g00001 91 SUPERFAMILY Aquaporin-like 2 84 IPR023271 -
Trme261268g00001 91 PANTHER AQUAPORIN-8 2 80 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme261268g00001 Trme-Chr261268 5 280 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme261268g00001 1 89 Major Intrinsic Protein MIP AT2G25810 83.146 1.53e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme261268g00001 K09873 - gmx:100793258 177.178