Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26095g00001 ATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGTCGACCATTCTGGGCAAGAACAGAATCAGGAATCTTTCGTACAGTTCTCAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCATCTGTGTCTCCAGAGGGCAAGGACTTTGTTAAAAGGCTCCTAAACAAGGACTACAGGAAAAGAATGACTGCTGCTCAAGCTCTAACTCACCCTTGGTTGAGGGATGAAAGCCGTCCTATCCCTTTAGATATATTAATTTATAAGTTGGTGAAATCTTATCTTCATGCGACACCATTCAAACGGGCCGCTGTAAAGGCCCTTTCAAAAGCATTGACAGAGGATCAGTTGGTGTATCTTAGAGCGCAATTCAGATTGTTGGAACCAAATAGAGATGGTCACGTCTCCCTCGACAACTTTAAAATG 426 0.4296 MTLLGVHIMLHLSRPFWARTESGIFRTVLRADPNFDDLPWPSVSPEGKDFVKRLLNKDYRKRMTAAQALTHPWLRDESRPIPLDILIYKLVKSYLHATPFKRAAVKALSKALTEDQLVYLRAQFRLLEPNRDGHVSLDNFKM 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26095g00001 142 ProSiteProfiles Protein kinase domain profile. 1 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme26095g00001 142 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 139 - -
Trme26095g00001 142 SUPERFAMILY Protein kinase-like (PK-like) 8 100 IPR011009 -
Trme26095g00001 142 ProSiteProfiles EF-hand calcium-binding domain profile. 115 142 IPR002048 GO:0005509
Trme26095g00001 142 Gene3D Transferase(Phosphotransferase) domain 1 4 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26095g00001 Trme-Chr26095 187 1075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26095g00001 4 141 EF-hand Containing Proteins AT2G46700 79.286 1.11e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme26095g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26095g00001 K13412 - rcu:8266291 251.136