Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme260720g00001 CTAGCTGGTGATGGCTTTGACACAGTGATCAAAGCAAAAGCTGCAGTTGACAGTGTTCCTGGTTGCCAAAACAAGGTTTCGTGTGCCGACATTTTGGCATTGGCAACTAGGGATGTCATAACATTGGTAAATAAGCAATAA 141 0.4326 LAGDGFDTVIKAKAAVDSVPGCQNKVSCADILALATRDVITLVNKQ 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme260720g00001 46 PANTHER - 1 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme260720g00001 46 Pfam Peroxidase 4 43 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme260720g00001 46 ProSiteProfiles Plant heme peroxidase family profile. 1 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme260720g00001 46 Gene3D - 2 46 - -
Trme260720g00001 46 SUPERFAMILY Heme-dependent peroxidases 4 43 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme260720g00001 Trme-Chr260720 2 142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme260720g00001 1 42 Peroxidase AT4G37530 80.952 1.04e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme260720g00001 K00430 - gmx:100793327 83.1889