Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26042g00001 ATGCAGACTCACGATTATTTTCATCCGGGAAAGGCGGTACTTCCTTTGGCAGATGAAGCCATTGGTACTTATATGAATGCTCCACACGCTTCTGCATTTGAAGCAGCTTTACCTCCGGGTGTGAGGCAGATGACACCCTTTGAAAGGTTTAACTTGCAGCCCTCAGAGGTTTGCCCTAAGAATTTCATCGTCTTTGATCAAACGGATCAACAGAACAGGATTTTGTTCCATCCTGCGACGACCTACAAGTTTAACAGTCCTGGCTTCAACACTCATGCTACTTATACTCAAGATTTTGAAAAGGATAAAATTAATCAAATGGAAAGGGAATTGTCGTCTTCTTTTGAGGAGGACTCTAAGGACATTGATGCGTTGATGAGCCTAGACTCAGACGAACTAGAAAACTATGACGATGAAGAAGTCAGCACAGCAAGGACTCATGAAAAAGATGAAAGTACATCTGATACTTGCTCCAGTTATTGCACGAAATCAAGGAAGAAAAAGAGGTTGTTATCATCTTCTGTACAAAACTCTTATGGGACAAAGGGTTACGGTAACAGCGAAAAGAAACAACACCTAGAGATGAAGAGGATGGTGAAAATGTTGAGAAATATCGTGCCTGGTGGAGGCAACCAAATGGACACTGTTACCGTTTTGGATGAAGCTGTGAAATACCTCAAGACTCTCAAGGTTGAAGTGGAGCAATTCGGAGTTGGACCATGA 723 0.4232 MQTHDYFHPGKAVLPLADEAIGTYMNAPHASAFEAALPPGVRQMTPFERFNLQPSEVCPKNFIVFDQTDQQNRILFHPATTYKFNSPGFNTHATYTQDFEKDKINQMERELSSSFEEDSKDIDALMSLDSDELENYDDEEVSTARTHEKDESTSDTCSSYCTKSRKKKRLLSSSVQNSYGTKGYGNSEKKQHLEMKRMVKMLRNIVPGGGNQMDTVTVLDEAVKYLKTLKVEVEQFGVGP 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26042g00001 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 229 IPR011598 GO:0046983
Trme26042g00001 240 MobiDBLite consensus disorder prediction 128 158 - -
Trme26042g00001 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 187 235 IPR036638 GO:0046983
Trme26042g00001 240 PANTHER TRANSCRIPTION FACTOR BHLH145 26 238 IPR037546 -
Trme26042g00001 240 MobiDBLite consensus disorder prediction 139 154 - -
Trme26042g00001 240 Gene3D - 185 237 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26042g00001 Trme-Chr26042 321 1043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26042g00001 16 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 38.843 2.66e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26042g00001 - - mtr:11405720 394.815