Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme26022g00001 ATGAGATATACAACAATGATTTTCCCTGATCCTCGAGATATTGTTTTGATTCAGATTAAGAACATTTTGGCGCCGGGTGCTGCTGATCCTCAGGGACATTGGCATAGCTGCAAGCTAGATATAAACAACTGCTCTTCTAATCAACTTGATCTAATGCAAGGCTTTAGAACACAATTTCTAAGAGCATTGACTGTTCTAGGAAACTCTCCGTCTAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACTGAAACGCAAGAAACATGGTTTCTAAGTGACTCTCCATTGTTGGCCAAGACAGTAAGAAACTGCACTATTCTTTTCTCCGTAAAATACAACATATCACGAGTTTCCAACTTGGATCATTTGCCGTTGCTGCAGAGTCGTTGGATCCAGACCATTGCACAAGCTGTGGCAGACTGGTTTTTTGAAAGAAGGCCTTTCCATCAGATAGATTGTCCTTACCCTTGCAATCCAAGCTGTCACAACCGCGTTTTTGAACCACAAGAAAATCCAGGAGTATAG 531 0.4162 MRYTTMIFPDPRDIVLIQIKNILAPGAADPQGHWHSCKLDINNCSSNQLDLMQGFRTQFLRALTVLGNSPSKGMFIDSCYAHCQTETQETWFLSDSPLLAKTVRNCTILFSVKYNISRVSNLDHLPLLQSRWIQTIAQAVADWFFERRPFHQIDCPYPCNPSCHNRVFEPQENPGV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme26022g00001 176 Pfam Pectinacetylesterase 17 102 IPR004963 GO:0016787
Trme26022g00001 176 PANTHER NOTUM-RELATED 17 165 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme26022g00001 Trme-Chr26022 461 1204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme26022g00001 18 174 Carbohydrate Esterase AT4G19420 56.442 1.19e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme26022g00001 K19882 - gmx:100818146 226.098