Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25978g00001 ATGGCTAACATTCTCAAAGTCCTGCAATGCTTTGAGCATTATAGTGCCATTTCTGCCTTTGCACCAGTAGCAAATCCTACAAATTGTCCTTGGGGACAGAAGGCATTCACCAATTATCTAGGTGACAATAAATCTGATTGGGAGGATTACGACGCCACTTATTTGGTGAGAAAGCATCCCAATGTATCTACCACCATTTTGATTGATCAG 210 0.4143 MANILKVLQCFEHYSAISAFAPVANPTNCPWGQKAFTNYLGDNKSDWEDYDATYLVRKHPNVSTTILIDQ 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25978g00001 70 Pfam Putative esterase 9 69 IPR000801 -
Trme25978g00001 70 SUPERFAMILY alpha/beta-Hydrolases 12 68 IPR029058 -
Trme25978g00001 70 Gene3D alpha/beta hydrolase 7 70 IPR029058 -
Trme25978g00001 70 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 7 70 IPR014186 GO:0018738|GO:0046294
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25978g00001 8 70 Carbohydrate Esterase AT2G41530 65.079 6.01e-26 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25978g00001 K01070 - gmx:100786814 108.227