LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme258400g00001	GGATGTGATGCATCAATTCTACTTAACAATACTGCAACCATCGTAAGTGAACAACAAGCTCTTCCAAACATCAACTCAATAAGAGGATTAGATGTGATTAACCAGATCAAAACTGCTGTTGAAAGTTCTTGTCCAGACATAGTTTCGTGTTCGGATATTCTTACACTAGCTGCTCAATCATCTTCTGTTCTGGTATATAATCTCATTCTTTAA	213	0.3615	GCDASILLNNTATIVSEQQALPNINSIRGLDVINQIKTAVESSCPDIVSCSDILTLAAQSSSVLVYNLIL	70

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme258400g00001	70	PRINTS	Plant peroxidase signature	47	57	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme258400g00001	70	PRINTS	Plant peroxidase signature	28	41	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme258400g00001	70	Pfam	Peroxidase	1	63	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trme258400g00001	70	ProSiteProfiles	Plant heme peroxidase family profile.	1	70	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trme258400g00001	70	SUPERFAMILY	Heme-dependent peroxidases	1	64	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Trme258400g00001	70	PANTHER	PEROXIDASE 72-RELATED	1	64	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trme258400g00001	70	Gene3D	-	1	68	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme258400g00001	Trme-Chr258400	102	314	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme258400g00001	1	64	Peroxidase	AT1G44970	59.375	1.26e-21	83.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme258400g00001	K00430		-	gmx:100804765	108.612