Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme257907g00001 TACAAGAAGAAGCTTAGAAAAGTTAGCAAAAGTGACACTTATGTTGAAATCGAATCCAATTTGCGCTGTTTCACTTATGAAGAGCTTGAAGAAGCTACGAATGGATTTGACAAAGAGCTAGGAAGGGGAGCTTTTGGTATTGTTTATGAAGGAGTCATCAACACAGGTTCCAGAACTCGTGTGGCAGTGAAAAAATTGAGCAGTTTTTTTGTTGCATCAAGGTCATAG 228 0.386 YKKKLRKVSKSDTYVEIESNLRCFTYEELEEATNGFDKELGRGAFGIVYEGVINTGSRTRVAVKKLSSFFVASRS 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme257907g00001 75 Gene3D Phosphorylase Kinase; domain 1 5 74 - -
Trme257907g00001 75 ProSitePatterns Protein kinases ATP-binding region signature. 40 65 IPR017441 GO:0005524
Trme257907g00001 75 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 14 67 - -
Trme257907g00001 75 SUPERFAMILY Protein kinase-like (PK-like) 10 67 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme257907g00001 2 67 Receptor kinase-like Gene Family AT4G20450 45.455 1.74e-10 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trme257907g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme257907g00001 - - mtr:11434023 112.849