Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme257765g00001 TATTATGCATCTCTACTGTTAGACAAATATGCTAGGCTGAAACAGGCCAAAGAAGAGGCTGCAAAGGAGATTGCCGAACATCGAGCTCATTTGGAAAACCAGTTTCAAAAGAAAGTATCAGCGAGCAGTGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAGACTGATACAAAGATCCAACACCTGAAAACTGAGGCTGGTAGAATTTCGGGGGATGTTGTTTCCATTCTTCTCAA 242 0.4298 YYASLLLDKYARLKQAKEEAAKEIAEHRAHLENQFQKKVSASSGDSGANVKRLEQETDTKIQHLKTEAGRISGDVVSILL 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme257765g00001 80 Pfam Vacuolar (H+)-ATPase G subunit 9 80 IPR005124 GO:0016471|GO:0046961|GO:1902600
Trme257765g00001 80 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 9 80 IPR005124 GO:0016471|GO:0046961|GO:1902600
Trme257765g00001 80 Gene3D - 7 80 - -
Trme257765g00001 80 Coils Coil 3 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme257765g00001 Trme-Chr257765 33 373 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme257765g00001 9 80 Primary Pumps ATPases(2) AT4G23710 68.056 2.53e-29 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme257765g00001 K02152 - gmx:100305477 109.768