Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25750g00001 ATGTGTGTGTGTGTCCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAGTGGTAAAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCACGAGTAGTGCAGACCACGGATCCTGAAAGAAATTATCACTGCTTTTACCAGTTGTGTGCATCTGAAAGGGATGTAGAAAAGTACAAGTTAGGACATCCAAGTCACTTCCACTATTTGAATCAAAGTAAAGTTTATGAATTAGACGGGGTAAGCAGTGCAGAAGAATACATAAAGACGAGAAGAGCAATGAATATTGTTGGCATAAGTCACGAGGATCAGGAAGCCATATTTCGCACCTTAGCTGCAATTTTACATCTGGGAAATGTTGAATTTTCTCCTGGGAAAGAGCATGACTCATCAATAATAAAGGATGAGAAATCAACATTTCATTTGCAGATGGCTGCTAACCTTTTCAA 458 0.3799 MCVCVRFGKFVEIQFDSSGKISGAAIRTYLLERSRVVQTTDPERNYHCFYQLCASERDVEKYKLGHPSHFHYLNQSKVYELDGVSSAEEYIKTRRAMNIVGISHEDQEAIFRTLAAILHLGNVEFSPGKEHDSSIIKDEKSTFHLQMAANLF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25750g00001 152 PANTHER MYOSIN 6 151 - -
Trme25750g00001 152 Gene3D Kinesin motor domain 4 150 IPR036961 -
Trme25750g00001 152 ProSiteProfiles Myosin motor domain profile. 1 152 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme25750g00001 152 SMART MYSc_2a 1 152 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme25750g00001 152 Pfam Myosin head (motor domain) 6 146 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme25750g00001 152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 151 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25750g00001 Trme-Chr25750 259 1108 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25750g00001 6 152 Myosins gene family AT4G33200 79.592 8.58e-79 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25750g00001 K10357 - gmx:100796413 282.337