Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25719g00001 ATGTCTGAAGAGGTTGGATCCATGTTGGCAGTTTATGATGATCCATCTGACCAACATTCACTGTCTTTCGGCGGCGATACAAGCAGCACCGAGGAATCCCCCGGTGAAACCAGACTCTCCTTGCAACCAACTAATGATCACATTCCATACATTGGTCAAAGGTTTTCCACCCATGATGAAGCTTATGAATTCTATAGTGATTTTGCTAAGAGTTGCGGCTTCTCAATTAGACGTCACCGTACAGAGGGAAAAGATGGTGTTGGGAAAGGACTTACTAGACGCTACTTTGTTTGTCATCGTGCTGGCAACACTCCTGCTAAATCAACGACCGAAACTAAACCTCAGAGAAATAGAAAATCTTCTCGATGTGGTTGTCAGGCTTATATGCGGATAAGCAAAACGACGGAATTTGGACCTCCAGAATGGCGTGTCACTGGTTTTGGTAACCACCATAATCATGAACTTTTGGAACCAAATCAAGTTCGGTTCCTTCCTGCATATAGAACTATATCAGATGTTGACAAAAACCGAATCCTTATGTTTGCCAAAACAGGGATTTCTGTTCATCAAATGATGAGGCTTATGGAGCTTGAGAAGTGCGTGGAACCAGGATATTTGCCTTTTACTGAAAAGGATGTAAGGAATTTACTCCAGTCGTTTAGAAAATTAGATCCAGAAGAAGAAAGCCTAGATCTGTTAAGAATGTGCAGAAATATTAAGGAGAGAGATCCTAATTTTAAATTTGAGTACACACTTGATGCAAACAACCGTTTAGAAAATATTGCCTGGTCATATGCCTCGTCGATCCAATTGTATGATATCTTTGGTGATGCTGTGGTATTTGATACAACACATCGTCTGACTGCATTTGACATGCCGCTGGGGATATGGGTTGGAATAAATAATTATGGAATGCCCTGCTTCTTTGGCTGTGTGCTATTGCGAGATGAAACTGTCAGGTCATTTTCCTGGGCAATAAAGGTAGTTAATGAAGAACTTATCAGTGTTTGTAACGTTTGGTTTTTTATTCAAATTGTCTTGTGGCCACTCGGCTTCTTCTCTGAAATAATACTGGTGTTGCTTATTTGTGATATGACAACAAGGTTTTTTATCGAAGATTGTGTAGCTATAAAAAATAATGCACTGTCTAGGAATAGGATATACTAA 1167 0.4002 MSEEVGSMLAVYDDPSDQHSLSFGGDTSSTEESPGETRLSLQPTNDHIPYIGQRFSTHDEAYEFYSDFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPAKSTTETKPQRNRKSSRCGCQAYMRISKTTEFGPPEWRVTGFGNHHNHELLEPNQVRFLPAYRTISDVDKNRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEESLDLLRMCRNIKERDPNFKFEYTLDANNRLENIAWSYASSIQLYDIFGDAVVFDTTHRLTAFDMPLGIWVGINNYGMPCFFGCVLLRDETVRSFSWAIKVVNEELISVCNVWFFIQIVLWPLGFFSEIILVLLICDMTTRFFIEDCVAIKNNALSRNRIY 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25719g00001 388 PANTHER OS01G0519700 PROTEIN 40 330 - -
Trme25719g00001 388 Pfam MULE transposase domain 279 331 IPR018289 -
Trme25719g00001 388 Pfam FAR1 DNA-binding domain 63 156 IPR004330 -
Trme25719g00001 388 MobiDBLite consensus disorder prediction 1 46 - -
Trme25719g00001 388 MobiDBLite consensus disorder prediction 20 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25719g00001 Trme-Chr25719 36 1202 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme25719g00001 FAR1 7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25719g00001 - - gmx:100810717 621.313