Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25702g00001 ATGGAATTTGGATTTAAAAATGCTATTGCCAAAGTAGGACTCATCAAGTTTTTGTCTGATCTTTTCTGGATTGGAATGTTTTACCATCTTTATAATCAGCTTGCTACTAATACTTTGGAACGTGTTGCACCACTAACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTTGTCATTGGATTCTCTATAGTAGTTTTTGGCAACACAATATCCACACAAACTGGCATTGGCACTGCTATTGCAATTGCAGGTGTTGCTGTCTATTCTCTGATAAAAGCAAACATGGAAGAGCAAAAACGG 300 0.37 MEFGFKNAIAKVGLIKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNTISTQTGIGTAIAIAGVAVYSLIKANMEEQKR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25702g00001 100 Pfam Triose-phosphate Transporter family 11 89 IPR004853 -
Trme25702g00001 100 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 90 - -
Trme25702g00001 100 PANTHER SOLUTE CARRIER FAMILY 35 17 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25702g00001 Trme-Chr25702 309 968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25702g00001 1 100 Antiporters AT5G46110 83.000 9.09e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25702g00001 K15283 - pvy:116132902 164.851