Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25687g00001 ATGCTTAGAATAAGTTTTGATGATTTAACTGATGATATGAAGGAGATGTTCCTTGATATTGCTTTGTTCTGTATTGGGATGGACCAAGAAGATGTAACTAAAATATTGGAAGACTGGGGGCATCATGTAGATACTGGTATAAGTATCCTTGTACAACAAAACCTTGTAACTGTTGATCCGATGAACAAGATTGGAATGCATAATATGCTGCAAGAAATGGGAAGAGGAATCATAAGGGGAAAACCAACGGCTGTGGCTAATGTAAGATATGCTTTTTTGAGGTTCTACTTGATTTATCATTAA 303 0.3564 MLRISFDDLTDDMKEMFLDIALFCIGMDQEDVTKILEDWGHHVDTGISILVQQNLVTVDPMNKIGMHNMLQEMGRGIIRGKPTAVANVRYAFLRFYLIYH 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25687g00001 100 SUPERFAMILY "Winged helix" DNA-binding domain 1 81 IPR036390 -
Trme25687g00001 100 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 82 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25687g00001 Trme-Chr25687 912 1214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25687g00001 2 78 WRKY Transcription Factor Family AT5G45050 41.558 1.30e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25687g00001 - - tpra:123891787 170.629