Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25682g00001 GATATTGAGGTGAACAATAGAAGAGTTAAAGTTCATAAAGTTGATGGCATTTTTGAATATACTGCATGGAAGAATCTGAGGGTAGGGAACATAGTGAAGGTAGAGAAGGACGAATTCTTCCCGGCTGACCTTGTATTGCTTTCATCCAGTTATGAGGATGCAGTCTGCTACGTTGAGACGATGAACTTGGATGGTGAGACAAATTTGAAGTTAAAACAAGGTTTAGAGGTAACTTCTTTCTTACATGATGATCTCAACTTCAAAAAATTTAAAGCTACCGTCAAATGCGAAGATCCAAATGCAAATTTGTATTTGTTTGTCGGGAGCATGGAGTTTGAACAGCAAAAGTATCCCCTTTCTTCTCAGCAACTTCTTCTGCGAGACTCTAAACTTCGTAATACAGACTATATTTTCGGAGCTGTTATCTTCACTGGCCACGACACTAAGGATCTATTTTCTTCGGCTTTATAA 471 0.3843 DIEVNNRRVKVHKVDGIFEYTAWKNLRVGNIVKVEKDEFFPADLVLLSSSYEDAVCYVETMNLDGETNLKLKQGLEVTSFLHDDLNFKKFKATVKCEDPNANLYLFVGSMEFEQQKYPLSSQQLLLRDSKLRNTDYIFGAVIFTGHDTKDLFSSAL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25682g00001 156 SUPERFAMILY Calcium ATPase, transduction domain A 10 149 IPR008250 -
Trme25682g00001 156 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 149 - -
Trme25682g00001 156 FunFam Phospholipid-transporting ATPase 1 155 - -
Trme25682g00001 156 Gene3D - 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25682g00001 Trme-Chr25682 610 1189 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25682g00001 1 149 Primary Pumps ATPases AT1G68710 79.195 1.82e-77 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25682g00001 K01530 - gmx:100781421 272.322