Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25615g00001 ATGAGCGACGCAGCAGGTTTGGTTCAATTCATGAATGCCGTAGGAGAAATTTCTCGCGGGATGAACATACCTTCAATCTTACCGGTCTGGAACAGAGAGCTTTTAAGTGCAAGAGATCAACCAAGAGTGACATTTCCTCATCGTGAATATGAACAAGTTCCAGATACCAAGGGAACCATTGTTCCCTTAGATGACATGGTTCACCGCTCTTTTTTCTTCGGTCCAACTGAGTTAGCCGCAATTCGCCCTCTATTTCCATCACACCTACAACGACAATCCAAATTCGAAATCATCACTGCATGTCTTTGGCGTTGTCGTACAATTGCATTACAACCTGACGCTGAAGAAGAAGTTCGCATAATTTGCGTAAGCAATGCACGTGGGAAATTTAATCCACCGTTACCAAAAGGTTATTACGGAAACACTTTTGTGTTTCCTGTTGCAGTTACAACCGCAGGAAAACTAATTGAAAATCCGTTGGGATATGCATTGGAGTTAATTAAAAAAGCAAAAACTGAAGTCACTCAAGAATATTTACATTCAATGGCGGATTTAATGGTTATCAAGGGTAGACCTCATATTACGGTGGTGAGAATGTATTTAGTGTCTGATGTTACACATGCCGGACTTCGAGATGTTGATTTTGGTTGGGGGAAAGCTGTATATGGAGGACCAGCTCATGGAGGAGTTGGTGTTGTACCTGGTTTTGCTAGCTTTTATATACCTTTTAAAAATGCTAAAGGAGAGGAAGGGATAATTATACCACTTTGTTTGCCAACTCAAGCCATGGAAAG 794 0.4131 MSDAAGLVQFMNAVGEISRGMNIPSILPVWNRELLSARDQPRVTFPHREYEQVPDTKGTIVPLDDMVHRSFFFGPTELAAIRPLFPSHLQRQSKFEIITACLWRCRTIALQPDAEEEVRIICVSNARGKFNPPLPKGYYGNTFVFPVAVTTAGKLIENPLGYALELIKKAKTEVTQEYLHSMADLMVIKGRPHITVVRMYLVSDVTHAGLRDVDFGWGKAVYGGPAHGGVGVVPGFASFYIPFKNAKGEEGIIIPLCLPTQAME 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25615g00001 264 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 263 - -
Trme25615g00001 264 Gene3D - 52 264 IPR023213 -
Trme25615g00001 264 Gene3D - 1 51 IPR023213 -
Trme25615g00001 264 Pfam Transferase family 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25615g00001 Trme-Chr25615 61 854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25615g00001 2 256 Monolignol Biosynthesis Gene Families AT5G48930 25.000 9.13e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25615g00001 K19861 - cam:101508667 425.631