Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25570g00001 CTTCCAAATAGCCGTGAGAGAATATGGTTAGGATCATATGATACACAAGAAAAAGCTGCAAGAGCATTTGATGCAGCTCTTTATTGTCTACGTGGTCGCCATGCTAGTTTCAATTTTCCTAATACACCTCTTACAATCAATGTAGCTGTTGGTGATCACAAATCTCTTTCACCACAAGAGATTCAAGAGATTGCTGCTAAGTTTGCCAATGATTACTCGCCACCAATTGAGTTGAGCAATCAAGAAGATGAAGAAGATCAACAAGTACCAATAGAGTCACAAAATGATGCCAATTCTAGTTCTAATTCTAATTATGATTCCTACTCATCTTGTCCTCTTTATGACAATGAGGGTGATATGAGGAGGATGGATTGGACATTTGAGGATATGTTTGATAACATGAATGGTGTTGCTAATGGCATTGATTATGGCCTCTATAATGGGCTAGAAAATATGCAATACTCAAGCAATAAATTGAATGGTGCAACCTCTTCACCAAACGGGATCAAGATCCTCTCAATTGGGTGA 528 0.3826 LPNSRERIWLGSYDTQEKAARAFDAALYCLRGRHASFNFPNTPLTINVAVGDHKSLSPQEIQEIAAKFANDYSPPIELSNQEDEEDQQVPIESQNDANSSSNSNYDSYSSCPLYDNEGDMRRMDWTFEDMFDNMNGVANGIDYGLYNGLENMQYSSNKLNGATSSPNGIKILSIG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25570g00001 175 SUPERFAMILY DNA-binding domain 4 40 IPR016177 GO:0003677
Trme25570g00001 175 Gene3D AP2/ERF domain 1 41 IPR036955 GO:0003700|GO:0006355
Trme25570g00001 175 MobiDBLite consensus disorder prediction 72 109 - -
Trme25570g00001 175 MobiDBLite consensus disorder prediction 91 109 - -
Trme25570g00001 175 CDD AP2 2 42 IPR001471 GO:0003700|GO:0006355
Trme25570g00001 175 ProSiteProfiles AP2/ERF domain profile. 1 40 IPR001471 GO:0003700|GO:0006355
Trme25570g00001 175 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 115 - -
Trme25570g00001 175 SMART rav1_2 2 46 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25570g00001 Trme-Chr25570 80 760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25570g00001 1 140 AP2-EREBP Transcription Factor Family AT1G74930 46.429 1.72e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25570g00001 - - vvo:131598518 225.328