Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme255487g00001 GCAAATGATCCTACAATTGAACGTATTATCACTCCTCGTATTGCTCTTACTACTGCTGAATATTTGGCTTATGAATGTGGCAAGCATGTTCTCGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTAATGTACCTTCTACTGTAA 159 0.3899 ANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVMYLLL 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme255487g00001 52 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 51 IPR027417 -
Trme255487g00001 52 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 48 IPR022879 -
Trme255487g00001 52 Gene3D - 1 52 - -
Trme255487g00001 52 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 49 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme255487g00001 Trme-Chr255487 86 244 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme255487g00001 1 47 Primary Pumps ATPases(2) AT1G20260 100.000 4.40e-27 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme255487g00001 K02147 - zof:122038643 95.5153