Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25521g00001 ATGTCCCCTCACATGAGTCCTACGGGCTTGAAACTTACATTGAAAGGTTTCATTGATGAAGCCAAGTCTCAGGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGATGCACTTGCACTTTATTTCGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAG 172 0.4535 MSPHMSPTGLKLTLKGFIDEAKSQVDSVTRLYSDVGRNADALALYFGEDPARCPFEQ 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25521g00001 57 Gene3D Formin, FH2 domain 4 57 IPR042201 -
Trme25521g00001 57 PANTHER FORMIN-J 13 57 - -
Trme25521g00001 57 SUPERFAMILY Formin homology 2 domain (FH2 domain) 11 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25521g00001 Trme-Chr25521 279 951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25521g00001 9 57 FH2 protein (formin) Gene Family AT1G31810 61.224 1.13e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25521g00001 - - tpra:123913936 93.2041