Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme255063g00001 ATGAAGCTGTTCATGATGATAATACTACCAGTTATTCTCTTTTGCTGTGTATTTCCACTGGCATTGGCACTGGATCTGCAAGTGGGATTCTACTCCACTTCGTGTGGAAAAGCCGAGTCCATTGTGCAGAAGCTTGTGGAGAAGCGGTTCAGCCAAGACAAATCAATAACGGCGGCCTTGCTTCGCATGCATTTCCACGACTGTTTTGTTAGA 213 0.4554 MKLFMMIILPVILFCCVFPLALALDLQVGFYSTSCGKAESIVQKLVEKRFSQDKSITAALLRMHFHDCFVR 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme255063g00001 71 SUPERFAMILY Heme-dependent peroxidases 23 70 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme255063g00001 71 Gene3D - 26 71 - -
Trme255063g00001 71 PRINTS Plant peroxidase signature 59 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme255063g00001 71 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme255063g00001 71 PANTHER PEROXIDASE 25-RELATED 14 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme255063g00001 71 ProSiteProfiles Plant heme peroxidase family profile. 25 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme255063g00001 71 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme255063g00001 Trme-Chr255063 125 337 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme255063g00001 13 71 Peroxidase AT4G26010 66.102 1.47e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme255063g00001 K00430 - egr:104443372 84.7297