Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme253793g00001 ATGGCAAAGAGTGAGGTGAAGCTTATTGGCAAATGGTCAAGTCCTTATGTGGCAAGAGTGAAGATTGCCCTTAACATCAAATCACTTGAATATGAAAATTTTGAAGAGAATGAAACCTTTAACCCCAAAAGTGATCTTCTTGTTCAATCCAACCCTGTTTATGGCAAAGTCCCAGTTCTAGTTCACCAAGATAAACCCATTTGTGAGTCTCTCATAATTGTTGAATACATAGATGAAACTTGGTCAAGTGCTCCTTCTATACTTCCCTCTGATTCTTATGATAGATCAGTTGCTCGATTCTGGGCTGCTTATATAGATCAAAAG 324 0.3796 MAKSEVKLIGKWSSPYVARVKIALNIKSLEYENFEENETFNPKSDLLVQSNPVYGKVPVLVHQDKPICESLIIVEYIDETWSSAPSILPSDSYDRSVARFWAAYIDQK 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme253793g00001 108 Gene3D Glutaredoxin 1 86 - -
Trme253793g00001 108 Pfam Glutathione S-transferase, N-terminal domain 5 79 IPR004045 -
Trme253793g00001 108 CDD GST_N_Tau 6 81 - -
Trme253793g00001 108 SUPERFAMILY Thioredoxin-like 6 107 IPR036249 -
Trme253793g00001 108 SFLD Glutathione Transferase (cytosolic) 11 107 IPR040079 -
Trme253793g00001 108 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 108 IPR045073 -
Trme253793g00001 108 Gene3D - 87 108 - -
Trme253793g00001 108 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 85 IPR004045 -
Trme253793g00001 108 FunFam Glutathione S-transferase GSTU6 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme253793g00001 Trme-Chr253793 22 345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme253793g00001 1 108 Glutathione S-transferase Gene Family AT1G10370 66.972 9.70e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme253793g00001 K00799 - cam:101508281 195.282