Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25365g00001 ATGTACCCAGCAGAGCTCTCTATGACTGCTTGGATTTGCTTTTTGGGTATCTTTGAAGGTGGAATTGCAACCTTCATATTTGAACGTGACATGAGTGTTTGGTCCTTAGGTTTTGACTCTAGACTTCTTGCTTGTGTTTACTCTGGTATAGTGTGTTCTGGAATGGCATACTATGTACAAGGAGTTGTAACAAGAGAACGTGGGCCTGTGTTTGTTACTTCTTTCAGCCCTTTATGTATGATCATCACAGCTGCATTGGGTTCTATTGTCTTAGCTGAGCAAACTCATTTGGGAAGGTATCCAATGTTTCATTAA 315 0.4063 MYPAELSMTAWICFLGIFEGGIATFIFERDMSVWSLGFDSRLLACVYSGIVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQTHLGRYPMFH 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25365g00001 104 PANTHER WAT1-RELATED PROTEIN 2 97 IPR030184 GO:0016020|GO:0022857
Trme25365g00001 104 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25365g00001 Trme-Chr25365 753 1171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25365g00001 2 100 Nodulin-like Gene Family AT1G21890 62.626 4.14e-43 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme25365g00001 - - tpra:123903307 200.29