Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme25244g00001 ATGACACATGGAGTACATAAAACTTATGAGGTTGGACTGTTATCTCAAAATGAAGCCCTTCATCTCTTTTGTTTGAAAGCCTTTAAAGCAGATCAACCACAAGAAGGGTATCTGGATTTGTCCAAAGAAGTGGTGGACTATACTGGCTGTCTTCCATTGGCACTTGAGGTTTTAGGTTCTTATCTTTATGGAAGAAATGTTGATCTTTGGCATAGTGCTGTTAAAAAAATAAGAAGTGCACCTCTCCGTGAAATCCAAGATAAACTGGAAATAAGTTATGAGAGTTTAGATGCCATGGAGAAGGCTATATTTCTAGATATTGCATGTTTCTTCAAGGGAATGGAAACAGATAAAATCGGGTTGTGGTCTCAAGAGGACATTGACCTTGTGTTGACAACCAATATGGGAACTGGAAAAATTAGCAGTATAGTTCTGAACTTTCTTCGACCATATGAAGCATGCTGGAGAACTGACGCATTCTCAAAGACAAGTCAGCTAAAATTGCTCATTTTAAATGAGTTTATGAAGAAGCTAAAGTACCTGAATTTGAAATTTTCCAAGAACCTAAAGAGATTGCCTGATTTTTCTGGGGTTCCAAATCTCGAAAAATTGATTCTTAAAGGCTGTGAAGGCCTAACTGAG 642 0.3754 MTHGVHKTYEVGLLSQNEALHLFCLKAFKADQPQEGYLDLSKEVVDYTGCLPLALEVLGSYLYGRNVDLWHSAVKKIRSAPLREIQDKLEISYESLDAMEKAIFLDIACFFKGMETDKIGLWSQEDIDLVLTTNMGTGKISSIVLNFLRPYEACWRTDAFSKTSQLKLLILNEFMKKLKYLNLKFSKNLKRLPDFSGVPNLEKLILKGCEGLTE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme25244g00001 214 Gene3D Ribonuclease Inhibitor 138 214 IPR032675 -
Trme25244g00001 214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 107 IPR027417 -
Trme25244g00001 214 Pfam NB-ARC domain 6 99 IPR002182 GO:0043531
Trme25244g00001 214 Gene3D - 13 97 IPR042197 -
Trme25244g00001 214 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 122 IPR044974 GO:0006952
Trme25244g00001 214 SUPERFAMILY L domain-like 158 212 - -
Trme25244g00001 214 Coils Coil 82 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme25244g00001 Trme-Chr25244 25 1215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme25244g00001 5 137 WRKY Transcription Factor Family AT5G45050 33.333 4.66e-15 71.6